Os11g0211800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0211800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 497.5 | 1.05 | 3.42 | -0.724 | 0.248 | 5.68 | -1.08 | -5.26 | 0.455 | 19.4 | 8.9 | 650 | -- | -- |
| 498.19 | 1.04 | 3.45 | -0.665 | 0.248 | 6.82 | -1.09 | -- | 0.453 | 19.5 | 9 | 649 | -- | -- |
| 500.61 | 1.04 | 3.42 | -0.692 | 0.244 | 5.71 | -- | -5.57 | 0.458 | 19.2 | 8.908 | 649 | -- | -- |
| 497.23 | 1.04 | 3.45 | -0.612 | 0.211 | 7.51 | -- | -- | 0.454 | 19.7 | 8.739 | 574 | -- | -- |
| 499.4 | 1.04 | 3.41 | -0.683 | -- | 6.26 | -- | -6.08 | 0.463 | -- | 8.705 | 575 | -- | -- |
| 704.58 | 1.24 | 3.51 | -1.27 | 0.506 | -- | -2.15 | -- | 0.211 | 19.7 | -- | -- | -- | -- |
| 717.64 | 1.25 | 3.51 | -1.22 | 0.504 | -- | -- | -- | 0.208 | 19.8 | -- | -- | -- | -- |
| 499.6 | 1.04 | 3.44 | -0.606 | -- | 7.62 | -- | -- | 0.455 | -- | 8.766 | 575 | -- | -- |
| 506.71 | 1.05 | 3.43 | -- | 0.205 | 7.81 | -- | -- | 0.53 | 19.5 | 8.71 | 576 | -- | -- |
| 731.4 | 1.26 | 3.5 | -1.23 | -- | -- | -- | -- | 0.201 | -- | -- | -- | -- | -- |
| 756.96 | 1.29 | 3.48 | -- | 0.513 | -- | -- | -- | 0.344 | 19.7 | -- | -- | -- | -- |
| 508.89 | 1.05 | 3.42 | -- | -- | 7.94 | -- | -- | 0.529 | -- | 8.7 | 575 | -- | -- |
| 771.13 | 1.3 | 3.47 | -- | -- | -- | -- | -- | 0.337 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 487.05 | wind | 9 | 720 | > th | dose dependent | rect. | 13 | 3 |
| 4 | 491.42 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 5 | 493.47 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 5 |
| 6 | 494.51 | wind | 9 | 720 | > th | dose independent | rect. | 13 | 3 |
| 13 | 498.12 | wind | 9 | 720 | > th | dose independent | rect. | 15 | 1 |
| 15 | 498.51 | wind | 9 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 18 | 498.80 | wind | 9 | 720 | > th | dose independent | rect. | 20 | 21 |
| 23 | 500.03 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 26 | 500.32 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 39 | 501.00 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 16 |
| 42 | 501.00 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 44 | 501.16 | wind | 9 | 720 | > th | dose dependent | sin | 21 | NA |
| 45 | 501.28 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 50 | 501.36 | wind | 9 | 270 | > th | dose independent | sin | 10 | NA |
| 52 | 501.40 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 80 | 501.86 | wind | 9 | 720 | > th | dose independent | sin | 22 | NA |
| 101 | 502.39 | wind | 9 | 720 | < th | dose independent | sin | 22 | NA |
| 102 | 502.42 | wind | 9 | 270 | < th | dose independent | sin | 11 | NA |
| 124 | 503.55 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 23 |
| 133 | 503.80 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 12 |
| 161 | 503.94 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 10 |
| 227 | 504.08 | wind | 9 | 720 | > th | dose independent | no | NA | NA |
| 259 | 504.09 | wind | 9 | 720 | > th | dose dependent | no | NA | NA |
| 323 | 504.40 | wind | 9 | 720 | < th | dose independent | no | NA | NA |
| 406 | 505.75 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 408 | 506.04 | wind | 7 | 270 | > th | dose dependent | sin | 15 | NA |
| 409 | 506.25 | wind | 9 | 720 | > th | dose independent | rect. | 15 | 23 |
| 432 | 508.67 | wind | 9 | 270 | > th | dose dependent | sin | 10 | NA |
| 994 | 528.89 | wind | 9 | 720 | < th | dose independent | rect. | 3 | 16 |