Os11g0211300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR disease resistance protein homologue (Fragment).
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Os11g0211300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR disease resistance protein homologue (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.85 | 0.512 | 5.78 | 1.75 | 0.646 | 0.531 | 0.658 | 1.98 | 0.59 | 7.27 | 23.68 | 2110 | -- | -- |
| 125.71 | 0.522 | 5.81 | 1.11 | 0.644 | 0.66 | 0.625 | -- | 0.651 | 7.08 | 29.41 | 4292 | -- | -- |
| 119.99 | 0.51 | 5.78 | 1.75 | 0.648 | 0.535 | -- | 1.94 | 0.586 | 7.2 | 23.66 | 2097 | -- | -- |
| 125.89 | 0.523 | 5.8 | 1.08 | 0.618 | 0.668 | -- | -- | 0.669 | 7.13 | 29.5 | 4274 | -- | -- |
| 138 | 0.547 | 5.79 | 1.7 | -- | 0.608 | -- | 2.04 | 0.598 | -- | 23.9 | 2849 | -- | -- |
| 140.7 | 0.556 | 5.81 | 1.26 | 0.618 | -- | 0.464 | -- | 0.631 | 6.84 | -- | -- | -- | -- |
| 141.25 | 0.557 | 5.81 | 1.27 | 0.62 | -- | -- | -- | 0.629 | 6.82 | -- | -- | -- | -- |
| 145.4 | 0.562 | 5.79 | 1.1 | -- | 0.698 | -- | -- | 0.761 | -- | 30.43 | 4318 | -- | -- |
| 153.99 | 0.578 | 5.85 | -- | 0.609 | 0.916 | -- | -- | 0.445 | 7.18 | 27.7 | 4256 | -- | -- |
| 161.36 | 0.594 | 5.82 | 1.29 | -- | -- | -- | -- | 0.641 | -- | -- | -- | -- | -- |
| 183.92 | 0.634 | 5.84 | -- | 0.635 | -- | -- | -- | 0.488 | 6.7 | -- | -- | -- | -- |
| 161.1 | 0.591 | 5.95 | -- | -- | 1.15 | -- | -- | 0.115 | -- | 21.7 | 12931 | -- | -- |
| 204.98 | 0.668 | 5.85 | -- | -- | -- | -- | -- | 0.499 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.05 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 2 | 117.07 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 105 | 118.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 20 |
| 113 | 118.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 12 |
| 122 | 118.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 8 |
| 172 | 119.11 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 181 | 119.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 197 | 119.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 5 |
| 258 | 119.30 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 290 | 119.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 5 |
| 309 | 119.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 310 | 119.37 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 324 | 119.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 21 |
| 330 | 119.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 356 | 119.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 637 | 119.65 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 692 | 119.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 731 | 119.73 | temperature | 10 | 1440 | > th | dose dependent | sin | 3 | NA |
| 744 | 119.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 21 |
| 833 | 119.82 | temperature | 10 | 1440 | > th | dose dependent | sin | 18 | NA |