Os11g0210600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alcohol dehydrogenase (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os11g0210600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alcohol dehydrogenase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 207.48 | 0.677 | 3.7 | -2.94 | 0.211 | -2.41 | 1.41 | 17 | -0.0318 | 15.2 | 29.95 | 1523 | -- | -- |
| 224.8 | 0.698 | 3.49 | -1.77 | 0.276 | -2.06 | 1.23 | -- | -0.638 | 15.9 | 19.3 | 33814 | -- | -- |
| 213.9 | 0.681 | 3.7 | -2.96 | 0.215 | -2.43 | -- | 17.3 | -0.0329 | 15.5 | 29.95 | 1527 | -- | -- |
| 226.9 | 0.702 | 3.46 | -1.44 | 0.258 | -1.77 | -- | -- | -0.534 | 16 | 19.3 | 45467 | -- | -- |
| 216.37 | 0.685 | 3.7 | -2.94 | -- | -2.44 | -- | 17.5 | -0.0344 | -- | 29.98 | 1547 | -- | -- |
| 248.31 | 0.739 | 3.31 | 0.498 | 0.215 | -- | 1.46 | -- | 0.152 | 15.4 | -- | -- | -- | -- |
| 254.84 | 0.748 | 3.31 | 0.525 | 0.237 | -- | -- | -- | 0.161 | 16.4 | -- | -- | -- | -- |
| 230.55 | 0.707 | 3.46 | -1.42 | -- | -1.74 | -- | -- | -0.523 | -- | 19.31 | 45389 | -- | -- |
| 237.39 | 0.718 | 3.38 | -- | 0.267 | -0.795 | -- | -- | -0.0943 | 16.1 | 19.84 | 31074 | -- | -- |
| 257.86 | 0.75 | 3.31 | 0.516 | -- | -- | -- | -- | 0.155 | -- | -- | -- | -- | -- |
| 262.12 | 0.757 | 3.32 | -- | 0.227 | -- | -- | -- | 0.102 | 16.5 | -- | -- | -- | -- |
| 240.19 | 0.722 | 3.37 | -- | -- | -0.693 | -- | -- | -0.0879 | -- | 21.8 | 36562 | -- | -- |
| 264.89 | 0.76 | 3.32 | -- | -- | -- | -- | -- | 0.0974 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 206.58 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 2 | 206.66 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 3 | 206.70 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 18 |
| 4 | 206.70 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 20 |
| 19 | 207.27 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 26 | 207.42 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 46 | 207.74 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 52 | 208.10 | temperature | 30.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 65 | 208.91 | temperature | 30.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 66 | 208.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 68 | 208.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 20 |
| 110 | 209.06 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 164 | 209.14 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 172 | 209.14 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 233 | 209.34 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 23 | 12 |
| 239 | 209.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 240 | 209.39 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 288 | 209.45 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 308 | 209.57 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 470 | 210.05 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 519 | 210.56 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 530 | 210.70 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 533 | 210.71 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 549 | 211.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 550 | 211.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 561 | 211.26 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 566 | 211.31 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 19 | 8 |
| 578 | 211.46 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 585 | 211.55 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 586 | 211.55 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 591 | 211.59 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 596 | 211.61 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 603 | 211.69 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 10 |
| 610 | 211.78 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 19 | 13 |
| 615 | 211.80 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 618 | 211.81 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 619 | 211.81 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 14 |
| 632 | 211.88 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 698 | 212.24 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 705 | 212.33 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 1 | 10 |
| 723 | 212.47 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 735 | 212.59 | humidity | 60.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 742 | 212.61 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 754 | 212.65 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 777 | 212.79 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 792 | 212.87 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 881 | 213.41 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 935 | 213.62 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 956 | 213.69 | temperature | 25.0 | 14400 | > th | dose independent | sin | 7 | NA |