Os11g0210100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant peroxidase family protein.
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Os11g0210100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant peroxidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.69 | 0.537 | 2.45 | 1.95 | 0.0676 | -12.8 | 0.303 | 75.4 | -0.054 | 23.5 | 999.3 | 10 | -- | -- |
| 136.87 | 0.549 | 2.79 | -0.00432 | 0.00492 | -0.242 | -0.411 | -- | -0.0597 | 8.1 | 994.8 | 20 | -- | -- |
| 130.5 | 0.536 | 2.41 | 2.19 | 0.0882 | -15.8 | -- | 93.6 | -0.0564 | 2.28 | 998.9 | 9 | -- | -- |
| 136.55 | 0.548 | 2.79 | -0.00765 | 0.0755 | -0.339 | -- | -- | -0.0659 | 2.58 | 997.5 | 39 | -- | -- |
| 130.74 | 0.533 | 2.41 | 2.17 | -- | -16.1 | -- | 95.5 | -0.0551 | -- | 998.8 | 5 | -- | -- |
| 136.93 | 0.549 | 2.79 | -0.0056 | 0.00525 | -- | -0.407 | -- | -0.0591 | 8.13 | -- | -- | -- | -- |
| 137.08 | 0.548 | 2.79 | -0.0206 | 0.0783 | -- | -- | -- | -0.0608 | 2.76 | -- | -- | -- | -- |
| 136.88 | 0.547 | 2.79 | -0.00419 | -- | -0.345 | -- | -- | -0.0641 | -- | 997.5 | 39 | -- | -- |
| 136.55 | 0.547 | 2.79 | -- | 0.0753 | -0.34 | -- | -- | -0.0651 | 2.57 | 997.5 | 39 | -- | -- |
| 137.43 | 0.548 | 2.79 | -0.0172 | -- | -- | -- | -- | -0.0588 | -- | -- | -- | -- | -- |
| 137.09 | 0.548 | 2.79 | -- | 0.0779 | -- | -- | -- | -0.0585 | 2.75 | -- | -- | -- | -- |
| 136.88 | 0.547 | 2.79 | -- | -- | -0.346 | -- | -- | -0.0637 | -- | 997.5 | 39 | -- | -- |
| 137.44 | 0.547 | 2.79 | -- | -- | -- | -- | -- | -0.0569 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.13 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 11 | 121.15 | wind | 1 | 10 | < th | dose independent | rect. | 13 | 1 |
| 13 | 121.15 | wind | 1 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 15 | 121.16 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 12 | 2 |
| 31 | 122.88 | radiation | 40 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 75 | 126.26 | wind | 1 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 76 | 126.34 | radiation | 40 | 10 | > th | dose independent | rect. | 14 | 1 |
| 114 | 126.78 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 120 | 127.67 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 126 | 127.99 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 12 | 11 |
| 127 | 128.04 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 13 | 9 |
| 135 | 128.11 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 137 | 128.12 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 10 | 4 |
| 157 | 128.55 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 12 | 5 |
| 203 | 128.88 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 10 | 1 |
| 210 | 129.15 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 16 | 22 |
| 228 | 129.31 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 23 | 15 |
| 244 | 129.48 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 12 | 20 |
| 257 | 129.55 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 19 | 19 |
| 269 | 129.57 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 21 | 17 |
| 293 | 129.66 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 18 | 21 |
| 295 | 129.67 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 20 | 19 |
| 332 | 129.75 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 369 | 129.88 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 9 | 13 |
| 375 | 129.90 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 10 | 1 |
| 413 | 130.11 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 9 | 13 |
| 424 | 130.19 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 9 | 20 |
| 466 | 130.37 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 472 | 130.39 | atmosphere | 1000 | 10 | < th | dose dependent | sin | 19 | NA |
| 652 | 130.84 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 2 |
| 694 | 130.95 | atmosphere | 1000 | 270 | < th | dose dependent | sin | 23 | NA |
| 700 | 130.98 | atmosphere | 1000 | 270 | < th | dose independent | sin | 21 | NA |
| 763 | 131.19 | temperature | 25 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 771 | 131.21 | atmosphere | 1000 | 270 | > th | dose independent | sin | 22 | NA |
| 857 | 131.37 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 859 | 131.38 | atmosphere | 1000 | 10 | < th | dose dependent | no | NA | NA |
| 872 | 131.38 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 874 | 131.38 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 962 | 131.47 | atmosphere | 1000 | 270 | < th | dose dependent | no | NA | NA |
| 978 | 131.48 | temperature | 25 | 90 | < th | dose dependent | rect. | 4 | 1 |