Os11g0210000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0210000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.33 | 0.509 | 5.33 | -1.77 | 0.449 | 1.18 | 0.977 | -5.51 | 0.875 | 23.3 | 49.8 | 4383 | -- | -- |
| 127.11 | 0.525 | 5.23 | -1.68 | 0.508 | 0.784 | 0.947 | -- | 0.574 | 22.8 | 87 | 28982 | -- | -- |
| 121.06 | 0.512 | 5.33 | -1.8 | 0.455 | 1.18 | -- | -5.48 | 0.875 | 22.8 | 49.91 | 4399 | -- | -- |
| 128.92 | 0.529 | 5.25 | -1.63 | 0.468 | 0.791 | -- | -- | 0.57 | 22.9 | 87 | 28986 | -- | -- |
| 133.5 | 0.538 | 5.32 | -1.88 | -- | 1.41 | -- | -5.9 | 0.892 | -- | 50 | 4382 | -- | -- |
| 145.74 | 0.566 | 5.19 | -1.58 | 0.483 | -- | 0.83 | -- | 0.842 | 23.4 | -- | -- | -- | -- |
| 148.58 | 0.571 | 5.19 | -1.61 | 0.483 | -- | -- | -- | 0.84 | 23 | -- | -- | -- | -- |
| 141.06 | 0.553 | 5.23 | -1.63 | -- | 0.838 | -- | -- | 0.596 | -- | 87.04 | 28362 | -- | -- |
| 188.37 | 0.639 | 5.22 | -- | 0.426 | 1.15 | -- | -- | 0.671 | 23.1 | 81 | 29071 | -- | -- |
| 163.12 | 0.597 | 5.18 | -1.6 | -- | -- | -- | -- | 0.843 | -- | -- | -- | -- | -- |
| 216.71 | 0.689 | 5.15 | -- | 0.47 | -- | -- | -- | 1.02 | 22.8 | -- | -- | -- | -- |
| 190 | 0.642 | 5.16 | -- | -- | 1.74 | -- | -- | 0.896 | -- | 72.2 | 47520 | -- | -- |
| 230.39 | 0.708 | 5.14 | -- | -- | -- | -- | -- | 1.02 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.78 | humidity | 50 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 60 | 113.15 | humidity | 50 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 66 | 113.43 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 67 | 113.44 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 69 | 113.45 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 70 | 113.46 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 12 | 12 |
| 75 | 113.48 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 83 | 113.50 | humidity | 50 | 14400 | < th | dose dependent | sin | 6 | NA |
| 109 | 113.57 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 126 | 113.71 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 133 | 113.73 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 148 | 113.78 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 184 | 113.91 | atmosphere | 1015 | 14400 | < th | dose independent | sin | 18 | NA |
| 238 | 114.10 | atmosphere | 1015 | 14400 | > th | dose independent | sin | 18 | NA |
| 296 | 114.23 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 300 | 114.24 | humidity | 50 | 14400 | > th | dose independent | rect. | 19 | 20 |
| 314 | 114.26 | humidity | 50 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 317 | 114.26 | humidity | 50 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 319 | 114.26 | humidity | 50 | 14400 | > th | dose independent | rect. | 22 | 17 |
| 321 | 114.27 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 411 | 114.39 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 462 | 114.48 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 485 | 114.52 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 548 | 114.57 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 842 | 114.79 | atmosphere | 1015 | 14400 | < th | dose independent | no | NA | NA |
| 855 | 114.80 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 856 | 114.80 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 9 | 15 |
| 959 | 114.92 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 995 | 114.95 | atmosphere | 1015 | 14400 | > th | dose independent | no | NA | NA |