Os11g0208800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor-like protein kinase.
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Os11g0208800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor-like protein kinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 207.05 | 0.676 | 8.2 | -1.18 | 0.56 | 2.27 | -0.017 | 8.69 | -0.0359 | 1.54 | 47.74 | 4274 | -- | -- |
| 274.69 | 0.772 | 8.17 | -1.6 | 0.664 | 1.77 | 0.533 | -- | -0.07 | 2.62 | 40 | 4021 | -- | -- |
| 206.31 | 0.669 | 8.2 | -1.2 | 0.542 | 2.32 | -- | 8.94 | -0.0347 | 1.54 | 48.34 | 4229 | -- | -- |
| 271.48 | 0.767 | 8.15 | -1.52 | 0.601 | 1.58 | -- | -- | -0.0891 | 1.74 | 39.98 | 4172 | -- | -- |
| 224.45 | 0.698 | 8.18 | -1.16 | -- | 2.45 | -- | 9.22 | -0.00883 | -- | 48.44 | 4225 | -- | -- |
| 314.46 | 0.831 | 8.13 | -1.64 | 0.696 | -- | 0.238 | -- | -0.029 | 1.55 | -- | -- | -- | -- |
| 314.68 | 0.831 | 8.14 | -1.65 | 0.696 | -- | -- | -- | -0.0303 | 1.54 | -- | -- | -- | -- |
| 291.55 | 0.795 | 8.14 | -1.48 | -- | 1.72 | -- | -- | -0.0489 | -- | 40 | 4119 | -- | -- |
| 303.72 | 0.812 | 8.21 | -- | 0.617 | 1.5 | -- | -- | -0.362 | 1.21 | 21.64 | 15773 | -- | -- |
| 344.35 | 0.867 | 8.13 | -1.62 | -- | -- | -- | -- | -0.0152 | -- | -- | -- | -- | -- |
| 386.15 | 0.919 | 8.09 | -- | 0.667 | -- | -- | -- | 0.153 | 1.46 | -- | -- | -- | -- |
| 323.86 | 0.838 | 8.2 | -- | -- | 1.53 | -- | -- | -0.344 | -- | 21.4 | 15644 | -- | -- |
| 413.48 | 0.949 | 8.09 | -- | -- | -- | -- | -- | 0.164 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.15 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 5 | 200.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 6 | 201.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 18 | 203.18 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 21 | 203.21 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 22 | 203.21 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 25 | 203.23 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 13 | NA |
| 26 | 203.24 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 33 | 203.33 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 34 | 203.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 15 |
| 36 | 203.37 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 47 | 203.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 48 | 203.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 56 | 203.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 11 |
| 69 | 203.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 71 | 203.78 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 74 | 203.82 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 75 | 203.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 76 | 203.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 80 | 203.94 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 11 | 19 |
| 81 | 203.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 86 | 204.03 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 87 | 204.03 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 90 | 204.06 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 106 | 204.19 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 107 | 204.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 108 | 204.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 8 |
| 111 | 204.20 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 112 | 204.21 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 11 |
| 113 | 204.22 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 114 | 204.22 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 115 | 204.22 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 11 |
| 119 | 204.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 120 | 204.26 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 122 | 204.27 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 124 | 204.27 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 131 | 204.29 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 134 | 204.30 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 135 | 204.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 136 | 204.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 11 |
| 140 | 204.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 142 | 204.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 175 | 204.48 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 15 |
| 211 | 204.61 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 8 |
| 231 | 204.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 243 | 204.79 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 245 | 204.79 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 255 | 204.85 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 269 | 204.92 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 16 | NA |
| 270 | 204.93 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 16 | NA |
| 273 | 204.93 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 299 | 205.04 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 11 | 14 |
| 304 | 205.05 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 11 | 10 |
| 305 | 205.06 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 328 | 205.12 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 11 | 19 |
| 342 | 205.16 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 362 | 205.23 | radiation | 10.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 380 | 205.31 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 382 | 205.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 21 |
| 411 | 205.45 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 23 |
| 419 | 205.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 4 |
| 426 | 205.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 429 | 205.53 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 478 | 205.69 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 486 | 205.72 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 488 | 205.73 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 495 | 205.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 8 |
| 502 | 205.76 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 11 | 19 |
| 512 | 205.80 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 513 | 205.81 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 515 | 205.81 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 520 | 205.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 12 |
| 526 | 205.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 553 | 205.96 | precipitation | 0.1 | 43200 | > th | dose dependent | no | NA | NA |
| 568 | 206.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 20 |
| 617 | 206.18 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 678 | 206.33 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 696 | 206.39 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 701 | 206.43 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 724 | 206.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 728 | 206.50 | radiation | 1.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 738 | 206.54 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 743 | 206.56 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 748 | 206.57 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 20 | 21 |
| 755 | 206.59 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 756 | 206.59 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 19 |
| 758 | 206.60 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 779 | 206.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 785 | 206.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 19 |
| 787 | 206.68 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 791 | 206.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 812 | 206.76 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 853 | 206.87 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 884 | 206.99 | radiation | 1.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 917 | 207.04 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 923 | 207.05 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 924 | 207.05 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 964 | 207.15 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |