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Os11g0208700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.9 (0.0336) R2 : 0.302
β1 : -0.0687 (0.126) R2dD : 0.000231 R2D : 0.00487
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.96 (0.187) R2dE : 0.178 R2E : 0.0975
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 7.51 (0.699) R2dD*E : 0.197 R2D*E : 0.121
γ1 : 0.05 (0.0718) R2dN8 : 0.00305 R2N8 : 0.00242
σ : 0.628
deviance : 181.69
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 51.18
memory length : 2891
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
171.42 0.615 9.9 -0.00396 0.411 1.62 0.222 6.57 0.0931 0.099 49.88 2893 -- --
207.27 0.671 9.92 -0.415 0.34 1.27 0.151 -- 0.037 23.5 42.8 2844 -- --
171.62 0.61 9.9 -0.00189 0.412 1.62 -- 6.56 0.0924 24 49.78 2891 -- --
204.78 0.666 9.93 -0.404 0.431 1.25 -- -- -0.0629 0.267 40 2844 -- --
181.69 0.628 9.9 -0.0687 -- 1.96 -- 7.51 0.05 -- 51.18 2891 -- --
237.85 0.723 9.9 -0.359 0.533 -- 0.341 -- 0.0589 0.38 -- -- -- --
238.32 0.723 9.9 -0.372 0.532 -- -- -- 0.0578 0.213 -- -- -- --
215.31 0.683 9.92 -0.412 -- 1.39 -- -- -0.0497 -- 40 2711 -- --
209 0.673 9.92 -- 0.428 1.24 -- -- -0.0146 0.23 40 2844 -- --
256.13 0.748 9.89 -0.354 -- -- -- -- 0.0658 -- -- -- -- --
241.96 0.728 9.89 -- 0.527 -- -- -- 0.0992 0.175 -- -- -- --
219.67 0.69 9.92 -- -- 1.36 -- -- -0.0379 -- 40 2707 -- --
259.44 0.752 9.88 -- -- -- -- -- 0.105 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 174.62 wind 5.0 14400 > th dose independent rect. 18 1
2 175.66 wind 7.0 43200 > th dose dependent rect. 18 1
3 176.33 radiation 40.0 4320 < th dose independent rect. 19 14
4 176.38 radiation 40.0 1440 > th dose independent rect. 14 19
6 176.51 radiation 40.0 4320 < th dose independent rect. 7 2
7 176.58 radiation 40.0 4320 < th dose independent rect. 22 11
8 176.63 radiation 40.0 4320 < th dose independent rect. 24 9
9 176.72 radiation 40.0 4320 < th dose independent rect. 16 17
11 176.83 radiation 40.0 4320 < th dose independent rect. 5 4
16 177.05 wind 9.0 43200 > th dose independent rect. 18 1
17 177.09 wind 5.0 14400 < th dose independent rect. 18 1
22 177.42 wind 3.0 14400 > th dose dependent rect. 18 1
25 177.88 wind 7.0 43200 < th dose dependent rect. 2 3
27 177.95 wind 1.0 43200 > th dose dependent rect. 2 2
30 178.11 humidity 90.0 14400 < th dose independent rect. 6 1
44 179.46 radiation 40.0 4320 > th dose independent rect. 7 2
64 179.64 wind 9.0 43200 < th dose independent rect. 18 1
72 180.22 temperature 25.0 14400 > th dose dependent rect. 2 1
76 180.58 precipitation 0.1 43200 > th dose dependent rect. 1 3
77 180.60 humidity 80.0 43200 < th dose independent rect. 9 2
78 180.60 radiation 40.0 14400 > th dose dependent rect. 14 19
79 180.72 precipitation 0.1 43200 > th dose dependent rect. 24 8
80 180.82 humidity 80.0 43200 > th dose independent rect. 9 2
81 180.86 precipitation 0.1 43200 > th dose independent rect. 24 8
82 180.90 precipitation 0.1 43200 < th dose independent rect. 24 8
83 180.90 precipitation 0.1 43200 < th dose dependent rect. 24 8
88 181.10 radiation 40.0 1440 > th dose independent rect. 14 1
89 181.10 precipitation 0.1 43200 > th dose dependent rect. 1 13
91 181.13 precipitation 0.1 43200 > th dose independent rect. 2 2
97 181.20 precipitation 0.1 43200 < th dose independent rect. 2 2
98 181.20 precipitation 0.1 43200 < th dose dependent rect. 2 2
116 181.45 humidity 80.0 43200 > th dose dependent rect. 8 2
117 181.46 precipitation 0.1 43200 > th dose dependent rect. 23 15
119 181.51 radiation 40.0 14400 > th dose dependent rect. 14 1
144 181.55 humidity 90.0 14400 > th dose independent rect. 1 3
158 181.74 humidity 90.0 14400 > th dose independent rect. 5 2
175 181.90 radiation 40.0 4320 > th dose dependent sin 12 NA
201 181.96 precipitation 0.1 43200 > th dose dependent rect. 2 15
211 182.01 temperature 25.0 14400 > th dose dependent rect. 24 6
253 182.25 precipitation 0.1 43200 > th dose independent rect. 2 12
254 182.25 precipitation 0.1 43200 < th dose independent rect. 2 12
256 182.25 precipitation 0.1 43200 < th dose dependent rect. 2 12
260 182.30 humidity 70.0 43200 > th dose dependent rect. 8 4
309 182.57 radiation 40.0 4320 > th dose dependent rect. 13 22
316 182.64 humidity 70.0 43200 > th dose dependent rect. 7 6
318 182.65 humidity 90.0 14400 > th dose independent rect. 1 6
326 182.72 precipitation 0.1 43200 > th dose dependent sin 6 NA
328 182.73 precipitation 0.1 43200 > th dose dependent rect. 23 18
332 182.77 precipitation 0.1 43200 > th dose independent rect. 23 15
340 182.81 humidity 80.0 14400 > th dose dependent rect. 6 1
342 182.83 precipitation 0.1 43200 < th dose independent rect. 23 15
343 182.83 precipitation 0.1 43200 < th dose dependent rect. 23 15
387 183.06 humidity 70.0 43200 > th dose dependent rect. 7 10
389 183.07 precipitation 0.1 43200 < th dose independent rect. 3 6
392 183.07 precipitation 0.1 43200 < th dose dependent rect. 3 6
415 183.19 radiation 10.0 43200 > th dose independent rect. 5 1
440 183.29 humidity 90.0 43200 > th dose independent rect. 15 1
442 183.32 temperature 25.0 14400 > th dose independent rect. 2 1
443 183.32 humidity 90.0 43200 < th dose independent rect. 13 4
460 183.42 humidity 90.0 14400 < th dose independent rect. 24 8
463 183.46 precipitation 0.1 43200 > th dose independent sin 6 NA
466 183.48 precipitation 0.1 43200 < th dose independent sin 6 NA
468 183.48 precipitation 0.1 43200 < th dose dependent sin 6 NA
470 183.49 humidity 90.0 43200 < th dose independent rect. 8 8
477 183.54 humidity 60.0 43200 > th dose dependent rect. 15 2
488 183.58 precipitation 0.1 43200 > th dose independent rect. 2 15
490 183.59 precipitation 0.1 43200 < th dose independent rect. 2 15
491 183.59 precipitation 0.1 43200 < th dose dependent rect. 2 15
495 183.62 humidity 90.0 43200 > th dose independent rect. 8 8
502 183.67 humidity 90.0 43200 > th dose independent rect. 11 7
509 183.70 precipitation 0.1 43200 > th dose dependent rect. 13 4
530 183.77 humidity 90.0 14400 > th dose dependent rect. 1 2
538 183.81 precipitation 0.1 43200 > th dose independent rect. 13 4
541 183.82 humidity 90.0 43200 < th dose independent rect. 11 6
543 183.82 radiation 20.0 14400 > th dose dependent rect. 6 2
557 183.83 wind 3.0 43200 > th dose independent rect. 3 1
559 183.84 precipitation 0.1 43200 < th dose independent rect. 13 4
561 183.84 precipitation 0.1 43200 < th dose dependent rect. 13 4
568 183.90 humidity 80.0 43200 > th dose dependent rect. 15 2
576 183.95 humidity 90.0 43200 > th dose dependent rect. 11 7
591 184.03 wind 3.0 43200 < th dose independent rect. 3 1
614 184.13 radiation 40.0 1440 < th dose independent rect. 14 1
638 184.23 humidity 90.0 43200 < th dose dependent rect. 14 1
651 184.29 humidity 90.0 43200 < th dose independent rect. 15 2
653 184.29 precipitation 0.1 43200 > th dose dependent rect. 19 1
677 184.40 precipitation 0.1 43200 > th dose independent rect. 19 1
681 184.41 precipitation 0.1 43200 < th dose independent rect. 19 1
683 184.41 precipitation 0.1 43200 < th dose dependent rect. 19 1
701 184.50 precipitation 0.1 43200 > th dose independent rect. 23 18
716 184.56 precipitation 0.1 43200 < th dose independent rect. 23 18
718 184.56 precipitation 0.1 43200 < th dose dependent rect. 23 18
732 184.64 precipitation 0.1 43200 > th dose independent rect. 7 1
735 184.65 humidity 80.0 43200 > th dose independent rect. 7 6
740 184.71 radiation 40.0 1440 < th dose independent rect. 14 11
762 184.81 precipitation 0.1 43200 > th dose dependent rect. 7 1
765 184.83 precipitation 0.1 43200 > th dose independent rect. 19 13
775 184.86 precipitation 0.1 43200 < th dose independent rect. 19 13
779 184.86 precipitation 0.1 43200 < th dose dependent rect. 19 13
782 184.88 radiation 40.0 1440 < th dose independent rect. 14 4
793 184.91 radiation 40.0 1440 < th dose independent rect. 14 7
796 184.92 radiation 40.0 1440 < th dose independent rect. 14 9
812 184.94 precipitation 0.1 43200 > th dose dependent rect. 19 13
813 184.95 wind 9.0 14400 < th dose dependent rect. 17 2
834 184.97 precipitation 0.1 43200 < th dose independent rect. 7 1
840 184.97 precipitation 0.1 43200 < th dose dependent rect. 7 1
866 185.07 humidity 90.0 43200 < th dose dependent rect. 11 5
919 185.25 humidity 80.0 43200 < th dose independent rect. 8 5
921 185.25 humidity 90.0 14400 < th dose independent rect. 23 17
931 185.30 temperature 25.0 14400 < th dose independent rect. 2 3
937 185.31 precipitation 0.1 43200 < th dose independent rect. 2 18
941 185.31 precipitation 0.1 43200 < th dose dependent rect. 2 18
954 185.35 humidity 90.0 14400 < th dose independent rect. 24 4
965 185.37 precipitation 0.1 43200 > th dose independent rect. 2 18
971 185.39 precipitation 0.1 43200 < th dose independent rect. 23 21
973 185.39 precipitation 0.1 43200 < th dose dependent rect. 23 21
979 185.41 precipitation 0.1 43200 > th dose independent rect. 23 21
993 185.45 precipitation 0.1 43200 > th dose dependent rect. 13 1