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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0208600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.41 (0.036) R2 : 0.368
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.761 (0.106) R2dC : 0.0977 R2C : 0.215
β3 : 1.25 (0.145) R2dE : 0.141 R2E : 0.267
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.136 (0.0762) R2dN8 : 0.00585 R2N8 : 0.00869
σ : 0.674
deviance : 209.65
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_____
C
peak time of C : 20.3
E
wheather : temperature
threshold : 24.65
memory length : 510
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
209.81 0.681 3.42 -0.151 0.773 1.29 0.391 -0.913 0.14 19.9 25.39 620 -- --
209.25 0.674 3.42 -0.0352 0.76 1.24 0.336 -- 0.097 20.2 23.93 510 -- --
209.13 0.674 3.42 -0.149 0.747 1.39 -- -1.19 0.118 20.6 25.16 464 -- --
209.62 0.674 3.41 -0.035 0.762 1.26 -- -- 0.13 20.3 24.6 510 -- --
231.25 0.708 3.39 -0.173 -- 1.78 -- -0.333 0.0799 -- 24.49 560 -- --
236.92 0.722 3.4 0.22 1.29 -- 0.705 -- 0.248 19.6 -- -- -- --
238.28 0.723 3.39 0.204 1.29 -- -- -- 0.25 19.5 -- -- -- --
231.32 0.708 3.4 -0.16 -- 1.83 -- -- 0.0702 -- 24.5 578 -- --
209.65 0.674 3.41 -- 0.761 1.25 -- -- 0.136 20.3 24.65 510 -- --
327.21 0.845 3.36 0.184 -- -- -- -- 0.229 -- -- -- -- --
239.38 0.724 3.4 -- 1.29 -- -- -- 0.227 19.5 -- -- -- --
231.99 0.709 3.4 -- -- 1.8 -- -- 0.084 -- 24.5 577 -- --
328.1 0.845 3.37 -- -- -- -- -- 0.209 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 206.43 temperature 25 270 > th dose dependent rect. 11 10
4 206.54 temperature 25 270 > th dose dependent sin 18 NA
8 206.74 temperature 25 270 > th dose dependent rect. 11 16
25 207.61 temperature 15 270 > th dose dependent sin 19 NA
60 208.32 temperature 30 270 < th dose independent sin 17 NA
66 208.56 temperature 25 720 > th dose dependent rect. 17 20
74 209.06 temperature 30 720 < th dose independent rect. 16 20
93 209.45 temperature 30 720 < th dose independent rect. 10 16
104 209.66 temperature 20 10 > th dose dependent rect. 14 8
124 209.83 temperature 30 270 > th dose independent sin 18 NA
143 209.97 temperature 30 270 > th dose independent rect. 12 7
174 209.98 temperature 15 720 > th dose dependent rect. 6 15
184 210.04 temperature 30 720 < th dose independent rect. 10 9
203 210.07 temperature 30 720 < th dose independent rect. 10 23
227 210.30 temperature 30 720 < th dose independent rect. 8 14
230 210.33 temperature 30 720 < th dose independent rect. 10 12
247 210.40 temperature 30 720 > th dose independent rect. 16 21
248 210.40 temperature 25 720 > th dose dependent rect. 6 17
261 210.46 temperature 10 720 > th dose dependent sin 23 NA
281 210.51 temperature 30 720 < th dose independent rect. 13 23
301 210.55 temperature 30 720 < th dose independent rect. 10 21
312 210.58 temperature 30 720 < th dose independent rect. 8 23
318 210.59 temperature 25 720 > th dose dependent no NA NA
339 210.65 temperature 25 720 > th dose dependent rect. 21 23
343 210.68 temperature 30 720 < th dose independent sin 10 NA
355 210.73 temperature 30 720 < th dose independent sin 20 NA
359 210.75 temperature 25 1440 > th dose independent rect. 6 1
373 210.79 radiation 1 720 > th dose dependent rect. 17 13
386 210.83 temperature 30 90 < th dose dependent sin 17 NA
463 211.08 temperature 25 1440 < th dose independent rect. 6 1
474 211.11 temperature 30 270 < th dose dependent sin 19 NA
478 211.12 temperature 30 720 < th dose independent rect. 5 23
512 211.21 radiation 1 720 > th dose dependent rect. 17 2
532 211.24 temperature 25 10 > th dose independent rect. 12 10
573 211.34 temperature 20 1440 > th dose dependent rect. 6 1
580 211.36 temperature 30 720 > th dose independent sin 11 NA
583 211.37 temperature 30 720 < th dose independent rect. 3 23
620 211.44 temperature 20 1440 > th dose dependent rect. 16 15
636 211.48 temperature 20 1440 > th dose dependent rect. 16 7
645 211.51 temperature 25 1440 > th dose dependent rect. 17 5
648 211.52 temperature 25 10 > th dose independent rect. 14 8
658 211.55 temperature 20 1440 > th dose dependent rect. 16 12
664 211.56 temperature 25 1440 > th dose dependent rect. 17 2
682 211.61 temperature 20 1440 > th dose dependent rect. 16 9
734 211.70 temperature 30 720 < th dose independent rect. 24 19
740 211.71 temperature 25 1440 < th dose independent rect. 18 6
748 211.73 temperature 30 720 < th dose independent rect. 24 23
750 211.73 wind 1 43200 > th dose dependent rect. 9 1
754 211.74 temperature 25 720 > th dose dependent sin 8 NA
759 211.75 temperature 10 1440 > th dose dependent rect. 17 2
785 211.77 wind 5 43200 < th dose dependent rect. 9 1
802 211.80 temperature 10 1440 > th dose dependent rect. 16 4
805 211.80 temperature 10 1440 > th dose dependent rect. 16 6
822 211.83 wind 9 43200 < th dose dependent rect. 9 1
833 211.85 temperature 30 720 < th dose independent no NA NA
878 211.92 temperature 30 720 > th dose independent no NA NA