Os11g0207600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myb-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0207600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Myb-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.24 | 0.477 | 5.52 | 1.22 | 0.905 | 0.869 | -0.491 | 0.389 | 0.0855 | 4.57 | 22.5 | 10 | -- | -- |
| 103.35 | 0.477 | 5.51 | 1.25 | 0.91 | 0.811 | -0.404 | -- | 0.092 | 4.57 | 22.5 | 10 | -- | -- |
| 103.75 | 0.478 | 5.51 | 1.24 | 0.905 | 0.835 | -- | 0.159 | 0.0917 | 4.56 | 22.5 | 10 | -- | -- |
| 103.79 | 0.478 | 5.51 | 1.26 | 0.907 | 0.808 | -- | -- | 0.0938 | 4.55 | 22.5 | 10 | -- | -- |
| 139.75 | 0.551 | 5.5 | 1.4 | -- | 1.27 | -- | -0.154 | 0.201 | -- | 35.72 | 17 | -- | -- |
| 110.75 | 0.493 | 5.53 | 1.1 | 0.978 | -- | -0.381 | -- | -0.00228 | 4.2 | -- | -- | -- | -- |
| 111.16 | 0.494 | 5.53 | 1.1 | 0.975 | -- | -- | -- | -0.000185 | 4.19 | -- | -- | -- | -- |
| 139.5 | 0.55 | 5.5 | 1.39 | -- | 1.27 | -- | -- | 0.193 | -- | 39.06 | 111 | -- | -- |
| 142.21 | 0.558 | 5.55 | -- | 0.971 | 0.298 | -- | -- | -0.0947 | 4.29 | 22.5 | 10 | -- | -- |
| 162.67 | 0.596 | 5.54 | 1.14 | -- | -- | -- | -- | 0.0258 | -- | -- | -- | -- | -- |
| 143.29 | 0.56 | 5.56 | -- | 0.997 | -- | -- | -- | -0.123 | 4.17 | -- | -- | -- | -- |
| 186.69 | 0.638 | 5.54 | -- | -- | 0.835 | -- | -- | -0.00753 | -- | 35.26 | 10 | -- | -- |
| 197.15 | 0.655 | 5.57 | -- | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.64 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 3 | 93.83 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 63 | 97.44 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 17 |
| 78 | 97.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 115 | 98.39 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 13 |
| 141 | 98.70 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 12 |
| 148 | 98.83 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 170 | 99.08 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 18 |
| 204 | 99.35 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 209 | 99.38 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 21 |
| 215 | 99.44 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 18 |
| 259 | 99.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 275 | 99.78 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 282 | 99.83 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 293 | 99.87 | temperature | 25.0 | 270 | < th | dose independent | rect. | 20 | 10 |
| 344 | 100.08 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 348 | 100.09 | temperature | 25.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 386 | 100.22 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 13 |
| 389 | 100.22 | temperature | 25.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 421 | 100.34 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 447 | 100.48 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 472 | 100.58 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 3 | 15 |
| 508 | 100.74 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 15 |
| 517 | 100.79 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 542 | 100.88 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 545 | 100.89 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 562 | 100.97 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 8 |
| 564 | 100.97 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 565 | 100.97 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 571 | 101.00 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 581 | 101.05 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 591 | 101.08 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 592 | 101.08 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 609 | 101.11 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 627 | 101.16 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 628 | 101.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 631 | 101.16 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 635 | 101.16 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 637 | 101.16 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 642 | 101.16 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 644 | 101.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 645 | 101.16 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 652 | 101.16 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 654 | 101.17 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 656 | 101.17 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 661 | 101.18 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 662 | 101.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 665 | 101.18 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 669 | 101.18 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 678 | 101.18 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 679 | 101.18 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 699 | 101.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 702 | 101.18 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 728 | 101.23 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 741 | 101.29 | radiation | 40.0 | 30 | < th | dose independent | rect. | 3 | 16 |
| 742 | 101.29 | temperature | 10.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 798 | 101.44 | temperature | 10.0 | 90 | > th | dose dependent | sin | 10 | NA |
| 804 | 101.46 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 819 | 101.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 829 | 101.54 | temperature | 25.0 | 270 | > th | dose independent | sin | 12 | NA |
| 881 | 101.65 | radiation | 10.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 884 | 101.66 | temperature | 25.0 | 270 | < th | dose independent | sin | 12 | NA |
| 893 | 101.69 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 13 |
| 923 | 101.74 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 16 |
| 935 | 101.76 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 3 | 11 |
| 953 | 101.81 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 9 |
| 962 | 101.83 | temperature | 20.0 | 10 | > th | dose independent | sin | 10 | NA |
| 977 | 101.86 | temperature | 20.0 | 10 | < th | dose independent | rect. | 13 | 21 |
| 980 | 101.86 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 4 |
| 999 | 101.90 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 6 |