Os11g0207000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0207000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.23 | 0.241 | 12.8 | 1.23 | 0.466 | -0.544 | -0.106 | 1.24 | 0.476 | 22.8 | 14.9 | 642 | -- | -- |
| 27.26 | 0.243 | 12.9 | 1.01 | 0.443 | -0.528 | 0.0653 | -- | 0.417 | 22.5 | 14.8 | 488 | -- | -- |
| 26.12 | 0.238 | 12.8 | 1.22 | 0.442 | -0.561 | -- | 1.25 | 0.472 | 22.4 | 15.32 | 474 | -- | -- |
| 27.28 | 0.243 | 12.9 | 1.01 | 0.439 | -0.545 | -- | -- | 0.418 | 22.4 | 14.62 | 488 | -- | -- |
| 31.64 | 0.263 | 12.8 | 1.17 | -- | -0.694 | -- | 0.963 | 0.476 | -- | 15.92 | 11 | -- | -- |
| 30.71 | 0.26 | 12.9 | 0.887 | 0.383 | -- | 0.0463 | -- | 0.337 | 23.7 | -- | -- | -- | -- |
| 30.72 | 0.26 | 12.9 | 0.885 | 0.383 | -- | -- | -- | 0.337 | 23.7 | -- | -- | -- | -- |
| 32.44 | 0.266 | 12.9 | 1.03 | -- | -0.727 | -- | -- | 0.437 | -- | 14.38 | 9 | -- | -- |
| 38.69 | 0.29 | 12.9 | -- | 0.356 | 0.538 | -- | -- | 0.0775 | 23.9 | 15.05 | 47520 | -- | -- |
| 39.93 | 0.295 | 12.9 | 0.896 | -- | -- | -- | -- | 0.341 | -- | -- | -- | -- | -- |
| 51.36 | 0.335 | 12.9 | -- | 0.393 | -- | -- | -- | 0.238 | 23.9 | -- | -- | -- | -- |
| 47.22 | 0.32 | 12.9 | -- | -- | 0.563 | -- | -- | 0.0494 | -- | 17.21 | 47095 | -- | -- |
| 61.11 | 0.365 | 12.9 | -- | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.68 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 15 |
| 2 | 23.69 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 58 | 24.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 85 | 24.81 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 98 | 24.87 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 104 | 24.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 114 | 24.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 15 |
| 126 | 24.96 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 145 | 25.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 169 | 25.08 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 185 | 25.10 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 186 | 25.11 | temperature | 15 | 270 | > th | dose dependent | sin | 0 | NA |
| 192 | 25.12 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 193 | 25.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 8 |
| 207 | 25.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 218 | 25.18 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 246 | 25.21 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 251 | 25.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 273 | 25.24 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 282 | 25.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 310 | 25.28 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 328 | 25.30 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 329 | 25.30 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 357 | 25.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 368 | 25.33 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 389 | 25.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 9 |
| 602 | 25.53 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 611 | 25.55 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 624 | 25.56 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 626 | 25.56 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 640 | 25.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 671 | 25.59 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 688 | 25.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 717 | 25.63 | temperature | 15 | 10 | > th | dose dependent | rect. | 12 | 10 |
| 748 | 25.65 | humidity | 70 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 790 | 25.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 22 |
| 822 | 25.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 896 | 25.77 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 912 | 25.78 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 927 | 25.79 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 958 | 25.81 | humidity | 80 | 270 | > th | dose independent | rect. | 7 | 17 |
| 977 | 25.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 989 | 25.83 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |