Os11g0206300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochodrial transcription termination factor-related family protein.
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Os11g0206300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochodrial transcription termination factor-related family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 216.39 | 0.691 | 2.75 | 1.29 | 0.188 | -46.7 | 0.577 | 122 | -0.0362 | 15.4 | 45 | 372 | -- | -- |
| 243.72 | 0.733 | 3.15 | 0.459 | 0.282 | -0.0789 | 1.16 | -- | -0.049 | 16.3 | 44.15 | 152 | -- | -- |
| 217.28 | 0.687 | 2.74 | 1.3 | 0.18 | -46.6 | -- | 122 | -0.026 | 16 | 45 | 374 | -- | -- |
| 219.88 | 0.691 | 3.16 | 0.255 | 0.163 | 3.2 | -- | -- | -0.0391 | 19.6 | 46 | 372 | -- | -- |
| 219.36 | 0.69 | 2.74 | 1.28 | -- | -46.5 | -- | 122 | -0.0366 | -- | 44.95 | 371 | -- | -- |
| 243.74 | 0.732 | 3.15 | 0.456 | 0.281 | -- | 1.15 | -- | -0.0487 | 16.3 | -- | -- | -- | -- |
| 247.34 | 0.736 | 3.15 | 0.466 | 0.292 | -- | -- | -- | -0.0425 | 16.7 | -- | -- | -- | -- |
| 220.69 | 0.692 | 3.16 | 0.255 | -- | 3.52 | -- | -- | -0.0391 | -- | 46 | 372 | -- | -- |
| 220.95 | 0.692 | 3.16 | -- | 0.183 | 3.41 | -- | -- | -0.097 | 17.9 | 45 | 376 | -- | -- |
| 251.86 | 0.742 | 3.15 | 0.455 | -- | -- | -- | -- | -0.0501 | -- | -- | -- | -- | -- |
| 253.06 | 0.744 | 3.16 | -- | 0.283 | -- | -- | -- | -0.0944 | 16.8 | -- | -- | -- | -- |
| 222.43 | 0.695 | 3.15 | -- | -- | 3.58 | -- | -- | -0.0632 | -- | 45.92 | 372 | -- | -- |
| 257.32 | 0.749 | 3.16 | -- | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.82 | humidity | 50.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 20 | 218.48 | humidity | 50.0 | 270 | < th | dose independent | sin | 12 | NA |
| 22 | 218.99 | humidity | 50.0 | 270 | > th | dose independent | sin | 12 | NA |
| 23 | 219.08 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 45 | 219.46 | humidity | 50.0 | 270 | < th | dose dependent | sin | 12 | NA |
| 50 | 220.16 | humidity | 50.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 73 | 220.46 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 115 | 220.93 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 117 | 221.01 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 118 | 221.14 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 164 | 221.56 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 170 | 221.61 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 195 | 221.76 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 203 | 222.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 204 | 222.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 207 | 222.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 208 | 222.68 | wind | 7.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 212 | 222.72 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 215 | 222.72 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 217 | 222.74 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 218 | 222.74 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 221 | 222.88 | wind | 7.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 225 | 222.97 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 227 | 222.97 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 253 | 223.36 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 255 | 223.36 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 256 | 223.38 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 21 | 19 |
| 257 | 223.39 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 260 | 223.39 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 24 | 16 |
| 272 | 223.45 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 274 | 223.47 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 19 | 4 |
| 275 | 223.47 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 298 | 223.55 | humidity | 50.0 | 270 | < th | dose dependent | no | NA | NA |
| 413 | 223.55 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 421 | 223.56 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 445 | 223.61 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 8 | 11 |
| 476 | 223.63 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 11 | 8 |
| 496 | 223.64 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 497 | 223.64 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 513 | 223.66 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 564 | 223.67 | humidity | 50.0 | 43200 | < th | dose dependent | no | NA | NA |
| 619 | 223.68 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 13 | 21 |
| 645 | 223.71 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 728 | 223.88 | humidity | 50.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 753 | 223.95 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 17 | 20 |
| 762 | 223.98 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 808 | 224.04 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 838 | 224.07 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 843 | 224.07 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 6 |
| 876 | 224.13 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 883 | 224.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 895 | 224.16 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 963 | 224.24 | humidity | 50.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 995 | 224.27 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 4 |