Os11g0205800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0205800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.97 | 0.579 | 4.71 | -2.09 | 0.622 | -2.25 | 1.28 | 1.46 | -0.472 | 17.4 | 24.32 | 745 | -- | -- |
| 154.39 | 0.579 | 4.69 | -1.83 | 0.621 | -2.38 | 1.23 | -- | -0.409 | 17.2 | 23.99 | 787 | -- | -- |
| 155.09 | 0.58 | 4.71 | -2.1 | 0.732 | -2.28 | -- | 1.34 | -0.466 | 17.7 | 24.1 | 971 | -- | -- |
| 156.92 | 0.583 | 4.68 | -1.88 | 0.691 | -2.5 | -- | -- | -0.401 | 17.6 | 23.68 | 864 | -- | -- |
| 163.53 | 0.596 | 4.73 | -2.29 | -- | -2.56 | -- | 2.46 | -0.525 | -- | 31.43 | 501 | -- | -- |
| 240.05 | 0.726 | 4.58 | -1.18 | 0.776 | -- | 0.62 | -- | 0.0486 | 18.8 | -- | -- | -- | -- |
| 240.84 | 0.727 | 4.58 | -1.19 | 0.777 | -- | -- | -- | 0.0493 | 19 | -- | -- | -- | -- |
| 168.61 | 0.605 | 4.68 | -1.82 | -- | -2.46 | -- | -- | -0.465 | -- | 29.28 | 476 | -- | -- |
| 236.65 | 0.716 | 4.6 | -- | 0.663 | -1.63 | -- | -- | -0.0605 | 18.3 | 23.7 | 640 | -- | -- |
| 272.64 | 0.772 | 4.56 | -1.2 | -- | -- | -- | -- | 0.0351 | -- | -- | -- | -- | -- |
| 278.02 | 0.78 | 4.55 | -- | 0.791 | -- | -- | -- | 0.182 | 18.9 | -- | -- | -- | -- |
| 247.06 | 0.732 | 4.59 | -- | -- | -1.91 | -- | -- | -0.101 | -- | 31.62 | 421 | -- | -- |
| 310.83 | 0.823 | 4.53 | -- | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 21 |
| 9 | 150.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 50 | 152.36 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 61 | 153.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 84 | 154.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 113 | 154.99 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 129 | 155.20 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 19 |
| 132 | 155.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 193 | 155.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 196 | 155.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 5 |
| 221 | 156.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 259 | 156.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 267 | 156.44 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 306 | 156.65 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 20 |
| 329 | 156.81 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 334 | 156.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 346 | 156.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 362 | 157.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 406 | 157.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 432 | 157.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 15 |
| 456 | 157.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 15 |
| 472 | 157.46 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 497 | 157.56 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 520 | 157.65 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 19 |
| 521 | 157.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 14 |
| 563 | 157.83 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 619 | 157.98 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 23 |
| 675 | 158.22 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 694 | 158.31 | temperature | 20 | 720 | < th | dose independent | rect. | 15 | 21 |
| 863 | 158.90 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 910 | 159.10 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 939 | 159.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |