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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0203900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.23 (0.0228) R2 : 0.000349
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0192 (0.0481) R2dN8 : 0.000451 R2N8 : 0.000349
σ : 0.43
deviance : 84.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.09 0.426 3.24 0.12 0.243 0.156 -0.092 0.373 -0.00167 4.43 89.71 236 -- --
82.48 0.423 3.23 0.101 0.251 0.171 -0.325 -- -0.00159 4.6 89.19 278 -- --
82.11 0.422 3.24 0.123 0.245 0.158 -- 0.409 -0.00131 4.44 89.64 233 -- --
82.75 0.424 3.23 0.1 0.248 0.179 -- -- -0.00595 4.77 89.26 283 -- --
83.33 0.427 3.23 0.105 -- -0.0457 -- 0.479 0.0455 -- 89.64 233 -- --
83.51 0.428 3.23 0.0617 0.121 -- -0.421 -- 0.0217 3.84 -- -- -- --
84 0.429 3.23 0.0678 0.122 -- -- -- 0.024 4.52 -- -- -- --
84.59 0.428 3.23 0.0818 -- 0.0722 -- -- 0.0155 -- 89.86 658 -- --
83.01 0.424 3.23 -- 0.242 0.167 -- -- -0.0147 4.74 89.41 282 -- --
84.8 0.43 3.23 0.0725 -- -- -- -- 0.0272 -- -- -- -- --
84.12 0.429 3.23 -- 0.123 -- -- -- 0.0165 4.51 -- -- -- --
84.08 0.427 3.24 -- -- 0.203 -- -- -0.0137 -- 86 1197 -- --
84.94 0.43 3.23 -- -- -- -- -- 0.0192 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 73.39 temperature 15.0 30 > th dose independent rect. 3 23
2 73.45 atmosphere 1015.0 30 < th dose dependent rect. 2 1
4 73.55 wind 3.0 30 < th dose independent rect. 2 1
5 73.55 temperature 25.0 30 < th dose independent rect. 2 1
6 73.55 wind 3.0 30 < th dose dependent rect. 2 1
14 73.58 temperature 10.0 30 > th dose independent rect. 2 1
17 73.58 humidity 50.0 30 > th dose independent rect. 2 1
20 73.58 atmosphere 995.0 30 > th dose independent rect. 2 1
21 73.58 atmosphere 1010.0 30 < th dose independent rect. 2 1
23 73.58 radiation 1.0 30 < th dose independent rect. 2 1
28 73.58 precipitation 0.1 30 < th dose independent rect. 2 1
30 73.58 temperature 10.0 30 > th dose dependent rect. 2 1
32 73.58 humidity 50.0 30 > th dose dependent rect. 2 1
33 73.58 radiation 1.0 30 < th dose dependent rect. 2 1
38 73.58 precipitation 0.1 30 < th dose dependent rect. 2 1
41 73.59 atmosphere 1005.0 30 > th dose dependent rect. 2 1
47 73.61 temperature 30.0 30 < th dose dependent rect. 2 1
51 73.67 atmosphere 995.0 30 > th dose dependent rect. 2 1
59 73.73 atmosphere 1005.0 30 > th dose independent rect. 2 1
66 73.79 wind 9.0 30 < th dose independent rect. 3 23
67 73.80 wind 1.0 30 > th dose independent rect. 2 1
107 74.54 atmosphere 995.0 30 > th dose independent rect. 3 23
116 75.56 precipitation 0.1 30 < th dose independent rect. 3 23
117 75.56 precipitation 0.1 30 < th dose dependent rect. 3 23
126 76.12 radiation 1.0 43200 < th dose dependent rect. 3 1
136 76.41 wind 9.0 1440 < th dose independent rect. 3 1
137 76.41 temperature 10.0 1440 > th dose independent rect. 3 1
140 76.41 temperature 30.0 1440 < th dose independent rect. 3 1
144 76.41 humidity 50.0 1440 > th dose independent rect. 3 1
153 76.41 atmosphere 995.0 1440 > th dose independent rect. 3 1
154 76.41 radiation 1.0 1440 < th dose independent rect. 3 1
175 76.41 temperature 10.0 1440 > th dose independent rect. 4 23
190 76.47 humidity 50.0 30 > th dose independent rect. 3 23
191 76.48 precipitation 0.1 720 < th dose independent rect. 15 8
192 76.48 precipitation 0.1 720 < th dose dependent rect. 15 8
193 76.51 humidity 50.0 720 > th dose independent rect. 23 16
194 76.54 wind 9.0 720 < th dose independent rect. 3 8
196 76.58 temperature 10.0 720 > th dose independent rect. 3 8
197 76.58 atmosphere 995.0 720 > th dose independent rect. 3 8
198 76.58 temperature 10.0 720 > th dose independent rect. 11 16
199 76.59 temperature 10.0 720 > th dose independent rect. 15 8
200 76.59 temperature 10.0 720 > th dose independent rect. 23 16
202 76.73 atmosphere 1015.0 720 < th dose independent rect. 3 8
203 76.78 humidity 50.0 720 > th dose independent rect. 3 8
204 76.91 atmosphere 995.0 720 > th dose independent rect. 23 16
213 77.42 precipitation 0.1 720 < th dose independent rect. 11 16
214 77.42 precipitation 0.1 720 < th dose dependent rect. 11 16
216 77.47 precipitation 0.1 720 < th dose independent rect. 23 16
217 77.47 precipitation 0.1 720 < th dose dependent rect. 23 16
218 77.55 precipitation 0.1 720 < th dose independent rect. 3 8
219 77.55 precipitation 0.1 720 < th dose dependent rect. 3 8
229 77.80 atmosphere 995.0 720 > th dose independent rect. 11 16
233 77.85 atmosphere 995.0 720 > th dose independent rect. 15 8
238 77.93 humidity 90.0 90 < th dose independent rect. 2 1
239 77.93 wind 9.0 720 < th dose independent rect. 15 8
240 77.94 wind 1.0 30 < th dose independent rect. 24 3
243 78.11 radiation 10.0 30 < th dose independent rect. 3 23
244 78.11 radiation 10.0 30 < th dose dependent rect. 3 23
245 78.16 radiation 40.0 720 < th dose independent rect. 15 8
278 78.45 wind 9.0 720 < th dose independent rect. 23 16
284 78.62 temperature 10.0 30 > th dose dependent rect. 3 23
285 78.63 wind 9.0 30 < th dose dependent rect. 3 23
290 78.77 atmosphere 1015.0 30 < th dose independent rect. 3 23
293 78.85 wind 1.0 720 > th dose independent rect. 15 8
308 79.27 atmosphere 1015.0 1440 < th dose independent rect. 3 1
314 79.34 wind 1.0 10 < th dose independent rect. 13 14
328 79.41 wind 3.0 10 < th dose dependent rect. 22 5
330 79.43 wind 1.0 10 < th dose independent rect. 17 10
340 79.56 wind 1.0 10 < th dose independent rect. 6 21
354 79.70 wind 1.0 30 > th dose dependent rect. 2 1
358 79.75 temperature 30.0 30 < th dose independent rect. 3 23
361 79.80 radiation 20.0 720 > th dose independent rect. 15 1
369 79.90 humidity 50.0 30 > th dose dependent rect. 3 23
375 80.01 wind 9.0 720 < th dose independent rect. 11 16
384 80.06 radiation 1.0 720 > th dose dependent rect. 15 1
399 80.17 humidity 50.0 720 > th dose independent rect. 7 8
450 80.25 humidity 50.0 720 > th dose independent rect. 17 8
452 80.26 temperature 25.0 720 > th dose dependent rect. 3 5
457 80.27 temperature 15.0 720 > th dose independent rect. 1 16
459 80.30 temperature 15.0 720 > th dose independent rect. 5 8
463 80.31 temperature 15.0 720 > th dose independent rect. 7 8
464 80.31 radiation 20.0 720 < th dose independent rect. 17 8
477 80.37 atmosphere 1015.0 720 < th dose independent rect. 1 16
489 80.41 humidity 90.0 10 > th dose independent rect. 24 3
494 80.42 wind 1.0 10 > th dose independent rect. 23 23
496 80.43 temperature 25.0 720 > th dose independent rect. 3 5
501 80.44 wind 7.0 720 < th dose independent rect. 13 16
513 80.49 temperature 15.0 720 > th dose independent rect. 17 8
519 80.49 wind 3.0 30 < th dose dependent rect. 16 11
520 80.49 wind 3.0 30 < th dose dependent rect. 13 14
526 80.50 temperature 25.0 30 > th dose independent rect. 24 11
541 80.53 atmosphere 995.0 720 > th dose independent rect. 5 8
542 80.53 atmosphere 1015.0 720 < th dose independent rect. 5 8
543 80.53 temperature 10.0 720 > th dose independent rect. 13 16
574 80.58 precipitation 0.1 720 < th dose independent rect. 5 8
575 80.58 temperature 15.0 720 > th dose independent rect. 15 16
576 80.58 precipitation 0.1 720 < th dose independent rect. 3 16
577 80.58 precipitation 0.1 720 < th dose dependent rect. 5 8
578 80.58 precipitation 0.1 720 < th dose dependent rect. 3 16
591 80.61 temperature 15.0 720 > th dose independent rect. 3 16
592 80.61 atmosphere 1015.0 720 < th dose independent rect. 23 16
598 80.64 wind 7.0 720 < th dose independent rect. 17 8
623 80.66 humidity 80.0 30 > th dose dependent rect. 22 5
626 80.67 radiation 40.0 90 < th dose independent rect. 11 16
629 80.68 humidity 60.0 720 > th dose independent rect. 19 8
633 80.68 atmosphere 1000.0 30 > th dose independent rect. 23 23
636 80.69 atmosphere 1015.0 720 < th dose independent rect. 3 16
642 80.70 wind 9.0 720 < th dose independent rect. 19 8
655 80.74 temperature 15.0 720 > th dose independent rect. 19 8
657 80.75 temperature 30.0 720 < th dose independent rect. 3 8
660 80.75 temperature 10.0 720 > th dose dependent rect. 3 1
661 80.75 radiation 40.0 720 < th dose dependent rect. 17 8
665 80.76 wind 1.0 10 > th dose independent rect. 17 14
673 80.79 temperature 25.0 270 > th dose independent rect. 22 5
674 80.79 radiation 40.0 720 < th dose independent rect. 15 16
690 80.80 precipitation 0.1 720 < th dose independent rect. 19 8
691 80.80 wind 9.0 720 < th dose independent rect. 15 16
695 80.80 precipitation 0.1 720 < th dose dependent rect. 19 8
706 80.83 humidity 60.0 1440 < th dose independent rect. 18 1
750 80.84 humidity 60.0 1440 < th dose dependent rect. 18 1
753 80.85 humidity 50.0 1440 > th dose independent rect. 17 3
755 80.85 atmosphere 1015.0 720 < th dose independent rect. 7 8
756 80.85 humidity 50.0 1440 > th dose independent rect. 17 10
787 80.88 temperature 20.0 30 > th dose independent rect. 3 4
789 80.88 humidity 50.0 1440 > th dose independent rect. 17 6
795 80.89 temperature 30.0 720 < th dose independent rect. 19 8
797 80.89 atmosphere 995.0 720 > th dose independent rect. 19 8
798 80.89 radiation 1.0 720 < th dose independent rect. 19 8
806 80.89 precipitation 0.1 720 < th dose independent rect. 1 16
812 80.89 radiation 1.0 720 < th dose dependent rect. 19 8
817 80.89 precipitation 0.1 720 < th dose dependent rect. 1 16
828 80.90 humidity 50.0 1440 < th dose independent rect. 17 17
830 80.90 humidity 70.0 720 > th dose dependent rect. 3 1
857 80.92 humidity 60.0 1440 > th dose independent rect. 18 14
861 80.92 humidity 50.0 1440 < th dose dependent rect. 17 17
867 80.93 humidity 50.0 1440 > th dose independent rect. 17 16
896 80.95 precipitation 0.1 720 < th dose independent rect. 7 8
898 80.95 precipitation 0.1 720 < th dose independent rect. 15 16
901 80.95 precipitation 0.1 720 < th dose dependent rect. 7 8
902 80.95 precipitation 0.1 720 < th dose dependent rect. 15 16
949 80.97 radiation 10.0 43200 < th dose dependent rect. 23 1
985 80.98 wind 9.0 720 < th dose independent rect. 7 8
991 80.98 humidity 90.0 90 < th dose independent rect. 1 16
993 80.98 temperature 15.0 30 > th dose dependent rect. 3 4