Os11g0197600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os11g0197600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.49 | 0.403 | 9.9 | 0.675 | 2.66 | -1.72 | 0.526 | -1.26 | 0.496 | 14.3 | 30.52 | 75 | 3.15 | 18.2 |
| 75.08 | 0.404 | 9.91 | 0.565 | 2.7 | -1.68 | 0.199 | -- | 0.474 | 14.3 | 30.83 | 46 | 3.5 | 18.1 |
| 73.97 | 0.401 | 9.9 | 0.662 | 2.65 | -1.76 | -- | -1 | 0.485 | 14.3 | 30.22 | 65 | 3.28 | 18.2 |
| 75.2 | 0.404 | 9.91 | 0.568 | 2.71 | -1.7 | -- | -- | 0.475 | 14.3 | 30.86 | 45 | 3.5 | 18.1 |
| 273.17 | 0.77 | 9.98 | 0.378 | -- | -3.63 | -- | -2.5 | 0.109 | -- | 31.53 | 13 | 6.15 | 24 |
| 123.93 | 0.522 | 9.88 | 0.825 | 2.64 | -- | 0.812 | -- | 0.661 | 14.9 | -- | -- | -- | -- |
| 126.17 | 0.526 | 9.88 | 0.844 | 2.64 | -- | -- | -- | 0.665 | 14.9 | -- | -- | -- | -- |
| 280.35 | 0.78 | 10 | -0.0405 | -- | -4.19 | -- | -- | 0.0364 | -- | 60.31 | 25 | 7.68 | 24 |
| 83.65 | 0.426 | 9.91 | -- | 2.66 | -1.74 | -- | -- | 0.441 | 14.3 | 30.6 | 50 | 3.43 | 18.1 |
| 527.94 | 1.07 | 9.89 | 0.732 | -- | -- | -- | -- | 0.597 | -- | -- | -- | -- | -- |
| 144.95 | 0.563 | 9.9 | -- | 2.62 | -- | -- | -- | 0.571 | 14.9 | -- | -- | -- | -- |
| 279.96 | 0.779 | 10 | -- | -- | -4.15 | -- | -- | 0.0418 | -- | 70.66 | 13 | 9.08 | 24 |
| 542.05 | 1.09 | 9.91 | -- | -- | -- | -- | -- | 0.516 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 3 | 76.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 15 | 78.94 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 16 | 79.44 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 18 | 79.66 | temperature | 10 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 28 | 80.89 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 67 | 83.53 | temperature | 30 | 30 | < th | dose dependent | sin | 3 | NA |
| 85 | 84.28 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 18 |
| 134 | 86.08 | temperature | 10 | 30 | > th | dose dependent | sin | 3 | NA |
| 162 | 86.91 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 233 | 88.13 | radiation | 1 | 270 | < th | dose dependent | sin | 2 | NA |
| 303 | 89.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 319 | 89.58 | radiation | 1 | 270 | < th | dose independent | sin | 2 | NA |
| 324 | 89.62 | radiation | 1 | 270 | > th | dose independent | sin | 2 | NA |
| 380 | 90.62 | radiation | 1 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 392 | 90.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 415 | 91.24 | radiation | 1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 417 | 91.28 | radiation | 1 | 270 | > th | dose independent | rect. | 17 | 23 |
| 421 | 91.36 | radiation | 1 | 270 | < th | dose independent | rect. | 2 | 17 |
| 541 | 92.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 559 | 92.95 | radiation | 1 | 270 | < th | dose independent | rect. | 1 | 19 |
| 648 | 93.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 656 | 94.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 681 | 94.30 | radiation | 1 | 270 | < th | dose independent | rect. | 23 | 22 |
| 698 | 94.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 713 | 94.55 | temperature | 20 | 30 | > th | dose dependent | rect. | 20 | 23 |
| 727 | 94.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 826 | 95.37 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 851 | 95.57 | temperature | 25 | 90 | < th | dose independent | sin | 3 | NA |
| 876 | 95.76 | radiation | 1 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 877 | 95.78 | radiation | 1 | 270 | > th | dose independent | rect. | 6 | 11 |
| 890 | 95.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 911 | 96.00 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 913 | 96.01 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 5 |
| 916 | 96.02 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 7 |
| 924 | 96.05 | humidity | 60 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 925 | 96.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 12 |
| 938 | 96.20 | temperature | 25 | 90 | > th | dose independent | sin | 3 | NA |
| 940 | 96.20 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 17 |
| 944 | 96.21 | humidity | 60 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 965 | 96.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 978 | 96.45 | wind | 9 | 270 | < th | dose dependent | rect. | 6 | 10 |