Os11g0197500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0197500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.07 | 0.558 | 8.43 | -2.9 | 0.565 | -1.02 | 0.972 | -0.463 | -0.553 | 14.2 | 0.1408 | 12529 | -- | -- |
| 141.16 | 0.553 | 8.42 | -2.87 | 0.572 | -1.05 | 0.972 | -- | -0.528 | 14.2 | 0.7121 | 12732 | -- | -- |
| 144.17 | 0.559 | 8.41 | -2.82 | 0.56 | -1.02 | -- | -0.238 | -0.524 | 14.6 | 0.0006884 | 12897 | -- | -- |
| 144.2 | 0.559 | 8.42 | -2.83 | 0.571 | -1.06 | -- | -- | -0.518 | 14.7 | 0.6888 | 12897 | -- | -- |
| 163.32 | 0.595 | 8.42 | -2.86 | -- | -1.04 | -- | -0.251 | -0.545 | -- | 0.5 | 12893 | -- | -- |
| 171.97 | 0.615 | 8.48 | -2.91 | 0.582 | -- | 0.897 | -- | -0.774 | 14.2 | -- | -- | -- | -- |
| 174.75 | 0.619 | 8.47 | -2.88 | 0.592 | -- | -- | -- | -0.768 | 14.6 | -- | -- | -- | -- |
| 163.4 | 0.595 | 8.42 | -2.85 | -- | -1.07 | -- | -- | -0.533 | -- | 0.6244 | 12897 | -- | -- |
| 346.43 | 0.867 | 8.34 | -- | 0.572 | -1.21 | -- | -- | -0.132 | 14.3 | 0.4404 | 16238 | -- | -- |
| 195.31 | 0.653 | 8.48 | -2.91 | -- | -- | -- | -- | -0.783 | -- | -- | -- | -- | -- |
| 393.51 | 0.928 | 8.4 | -- | 0.649 | -- | -- | -- | -0.447 | 14.7 | -- | -- | -- | -- |
| 368.25 | 0.894 | 8.33 | -- | -- | -1.29 | -- | -- | -0.136 | -- | 0.4352 | 16129 | -- | -- |
| 418.09 | 0.954 | 8.41 | -- | -- | -- | -- | -- | -0.461 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.06 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 5 | 135.47 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 10 | 13 |
| 6 | 135.53 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 11 | 11 |
| 11 | 135.57 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 11 | 11 |
| 12 | 135.58 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 25 | 135.76 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 57 | 136.36 | temperature | 20.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 58 | 136.36 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 91 | 136.86 | temperature | 20.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 99 | 136.99 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 112 | 137.28 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 157 | 137.94 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 162 | 138.02 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 401 | 140.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 423 | 140.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 425 | 140.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 22 |
| 426 | 140.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 22 |
| 431 | 140.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 433 | 140.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 434 | 140.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 453 | 140.99 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 458 | 141.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 22 |
| 482 | 141.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 483 | 141.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 20 |
| 489 | 141.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 494 | 141.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 498 | 141.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 499 | 141.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 10 |
| 574 | 141.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 580 | 141.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 581 | 141.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 584 | 141.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 22 |
| 589 | 141.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 597 | 141.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 600 | 141.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 626 | 141.90 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 12 | NA |
| 629 | 141.92 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 13 | NA |
| 633 | 141.94 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 13 | NA |
| 636 | 141.94 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 13 | NA |
| 645 | 141.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 16 |
| 647 | 141.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 677 | 142.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 20 |
| 681 | 142.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 20 |
| 684 | 142.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 20 |
| 686 | 142.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 690 | 142.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 698 | 142.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 702 | 142.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 20 |
| 734 | 142.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 22 |
| 749 | 142.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 19 |
| 776 | 142.27 | temperature | 20.0 | 14400 | > th | dose independent | no | NA | NA |
| 791 | 142.29 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 797 | 142.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 19 |
| 801 | 142.31 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 806 | 142.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 22 |
| 813 | 142.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 22 |
| 814 | 142.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 22 |
| 816 | 142.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 19 |
| 822 | 142.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 19 |
| 833 | 142.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 17 |
| 838 | 142.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 839 | 142.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 840 | 142.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 843 | 142.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 844 | 142.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 862 | 142.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 17 |
| 867 | 142.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 17 |
| 884 | 142.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 909 | 142.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 23 |
| 954 | 142.54 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 955 | 142.54 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 963 | 142.54 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |