Os11g0197200 - FiT-DB

FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0197200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	3.34	(0.0255)	R²	:	0.271
β₁	:	--	(--)	R²_dD	:	--	R²_D	:	--
β₂	:	--	(--)	R²_dC	:	--	R²_C	:	--
β₃	:	-1.09	(0.0854)	R²_dE	:	0.262	R²_E	:	0.252
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	0.164	(0.0538)	R²_dN8	:	0.0193	R²_N8	:	0.00901
σ	:	0.479
deviance	:	105.9
__

_____

C
peak time of C	:	--
E
wheather	:	wind
threshold	:	1.155
memory length	:	11
response mode	:	> th
dose dependency	:	dose independent
G
type of G	:	no
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
95.31	0.459	3.36	-0.377	0.323	-1.01	-0.73	0.743	0.104	3.86	1.1	11	--	--
95.86	0.456	3.35	-0.345	0.329	-0.965	-0.831	--	0.112	3.82	1.137	11	--	--
96.65	0.458	3.35	-0.376	0.33	-1.01	--	0.996	0.105	4.45	1.113	11	--	--
97.69	0.46	3.34	-0.331	0.342	-0.945	--	--	0.116	4.48	1.138	11	--	--
101.44	0.469	3.36	-0.395	--	-1.2	--	1.16	0.115	--	1.134	11	--	--
119.77	0.513	3.35	-0.225	0.642	--	-0.646	--	0.0897	4.22	--	--	--	--
120.89	0.515	3.35	-0.218	0.641	--	--	--	0.0932	4.37	--	--	--	--
102.87	0.472	3.35	-0.342	--	-1.13	--	--	0.127	--	1.178	11	--	--
100.54	0.467	3.34	--	0.348	-0.906	--	--	0.151	4.5	1.126	11	--	--
142.93	0.559	3.35	-0.193	--	--	--	--	0.11	--	--	--	--	--
122.15	0.517	3.34	--	0.636	--	--	--	0.118	4.38	--	--	--	--
105.9	0.479	3.34	--	--	-1.09	--	--	0.164	--	1.155	11	--	--
143.92	0.56	3.34	--	--	--	--	--	0.132	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	92.56	wind	3.0	90	< th	dose dependent	rect.	1	4
2	92.56	wind	3.0	10	< th	dose dependent	rect.	2	4
11	95.83	wind	1.0	90	< th	dose independent	rect.	1	4
12	96.06	wind	1.0	10	> th	dose independent	sin	4	NA
15	96.20	temperature	30.0	720	> th	dose dependent	rect.	18	15
18	96.60	wind	1.0	10	> th	dose independent	rect.	3	23
20	96.82	temperature	30.0	720	> th	dose dependent	rect.	18	1
35	96.95	wind	1.0	10	< th	dose independent	rect.	2	16
39	97.03	wind	1.0	10	< th	dose independent	rect.	2	12
40	97.03	wind	1.0	10	< th	dose independent	rect.	2	14
52	97.60	wind	1.0	10	> th	dose independent	no	NA	NA
55	97.64	wind	1.0	10	< th	dose independent	rect.	2	4
56	97.65	wind	1.0	90	> th	dose independent	rect.	4	21
57	97.68	wind	1.0	10	< th	dose independent	rect.	2	21
61	97.79	wind	9.0	1440	< th	dose independent	rect.	3	3
62	97.79	temperature	10.0	1440	> th	dose independent	rect.	3	3
65	97.79	temperature	30.0	1440	< th	dose independent	rect.	3	3
69	97.79	humidity	50.0	1440	> th	dose independent	rect.	3	3
78	97.79	atmosphere	995.0	1440	> th	dose independent	rect.	3	3
79	97.79	radiation	20.0	1440	< th	dose independent	rect.	3	3
88	97.79	temperature	10.0	1440	> th	dose independent	rect.	6	21
92	97.87	humidity	90.0	10	> th	dose independent	rect.	2	4
148	98.28	wind	5.0	270	< th	dose dependent	rect.	1	1
155	98.43	temperature	10.0	270	> th	dose dependent	rect.	1	1
156	98.44	wind	1.0	90	< th	dose independent	rect.	4	1
171	98.64	humidity	50.0	1440	< th	dose independent	rect.	16	1
175	98.73	humidity	50.0	1440	< th	dose dependent	rect.	16	1
178	98.86	wind	1.0	10	< th	dose independent	rect.	2	7
181	98.89	humidity	70.0	90	> th	dose dependent	rect.	1	4
190	99.00	humidity	70.0	720	> th	dose independent	rect.	19	6
196	99.09	wind	3.0	10	< th	dose dependent	rect.	24	9
200	99.15	wind	1.0	90	< th	dose dependent	rect.	4	1
203	99.21	atmosphere	1005.0	270	> th	dose independent	rect.	1	1
205	99.25	wind	3.0	270	< th	dose independent	rect.	1	1
219	99.44	wind	1.0	10	> th	dose independent	rect.	21	14
220	99.47	temperature	15.0	10	> th	dose dependent	rect.	2	4
222	99.48	temperature	20.0	90	> th	dose independent	rect.	1	4
224	99.55	wind	1.0	10	> th	dose independent	rect.	9	23
233	99.65	temperature	20.0	10	> th	dose independent	rect.	2	4
242	99.78	atmosphere	1005.0	270	> th	dose independent	rect.	24	3
246	99.84	humidity	80.0	90	> th	dose independent	rect.	1	4
247	99.85	humidity	60.0	270	> th	dose dependent	rect.	1	1
255	99.98	temperature	20.0	270	> th	dose independent	rect.	1	2
257	100.00	wind	1.0	10	< th	dose independent	rect.	11	19
259	100.02	wind	1.0	10	< th	dose independent	sin	3	NA
261	100.06	temperature	30.0	720	< th	dose independent	rect.	18	7
297	100.13	precipitation	0.1	90	< th	dose independent	rect.	1	4
298	100.13	precipitation	0.1	90	< th	dose dependent	rect.	1	4
304	100.18	wind	1.0	10	> th	dose independent	rect.	21	23
310	100.28	wind	1.0	10	> th	dose independent	rect.	21	11
312	100.30	wind	3.0	10	< th	dose dependent	rect.	2	14
316	100.35	wind	3.0	10	< th	dose dependent	rect.	2	17
321	100.38	radiation	1.0	90	< th	dose dependent	rect.	1	4
324	100.39	radiation	1.0	90	< th	dose independent	rect.	1	4
329	100.40	humidity	80.0	270	> th	dose independent	rect.	1	1
330	100.40	wind	7.0	90	< th	dose independent	rect.	1	4
339	100.45	humidity	50.0	1440	> th	dose independent	rect.	16	1
340	100.45	precipitation	0.1	270	< th	dose independent	rect.	1	1
342	100.45	precipitation	0.1	270	< th	dose dependent	rect.	1	1
345	100.46	temperature	10.0	90	> th	dose independent	rect.	1	4
347	100.46	temperature	30.0	90	< th	dose independent	rect.	1	4
348	100.46	humidity	50.0	90	> th	dose independent	rect.	1	4
351	100.46	atmosphere	995.0	90	> th	dose independent	rect.	1	4
352	100.46	atmosphere	1010.0	90	< th	dose independent	rect.	1	4
358	100.46	temperature	10.0	90	> th	dose independent	rect.	5	20
361	100.50	wind	7.0	270	< th	dose independent	rect.	1	1
365	100.53	wind	3.0	10	< th	dose dependent	rect.	2	12
373	100.60	temperature	30.0	720	> th	dose independent	rect.	18	1
392	100.63	temperature	10.0	270	> th	dose independent	rect.	1	1
394	100.63	temperature	30.0	270	< th	dose independent	rect.	1	1
395	100.63	humidity	50.0	270	> th	dose independent	rect.	1	1
398	100.63	atmosphere	995.0	270	> th	dose independent	rect.	1	1
399	100.63	atmosphere	1010.0	270	< th	dose independent	rect.	1	1
401	100.63	radiation	1.0	270	< th	dose independent	rect.	1	1
406	100.63	temperature	10.0	270	> th	dose independent	rect.	2	23
407	100.63	radiation	1.0	270	< th	dose dependent	rect.	1	1
417	100.66	wind	9.0	90	< th	dose independent	rect.	5	20
421	100.67	humidity	80.0	10	> th	dose dependent	rect.	2	4
464	100.87	temperature	10.0	270	> th	dose independent	rect.	3	21
471	100.88	atmosphere	995.0	90	> th	dose independent	rect.	5	20
476	100.94	atmosphere	1015.0	1440	< th	dose independent	rect.	3	3
481	100.96	atmosphere	995.0	270	> th	dose dependent	rect.	1	1
489	101.03	wind	1.0	10	> th	dose independent	rect.	19	23
493	101.07	temperature	30.0	720	< th	dose independent	rect.	18	15
494	101.07	atmosphere	995.0	90	> th	dose dependent	rect.	1	4
504	101.14	precipitation	0.1	90	< th	dose independent	rect.	5	20
506	101.14	precipitation	0.1	90	< th	dose dependent	rect.	5	20
511	101.16	atmosphere	1005.0	10	> th	dose independent	rect.	2	4
523	101.23	wind	1.0	10	< th	dose independent	rect.	8	22
541	101.31	humidity	70.0	720	< th	dose independent	rect.	19	12
542	101.31	wind	1.0	90	< th	dose independent	rect.	11	18
585	101.45	wind	1.0	270	> th	dose independent	rect.	24	3
591	101.51	humidity	70.0	720	< th	dose independent	rect.	19	1
625	101.70	wind	9.0	270	< th	dose independent	rect.	3	21
630	101.75	atmosphere	995.0	270	> th	dose independent	rect.	3	21
635	101.78	humidity	70.0	720	< th	dose dependent	rect.	19	12
645	101.84	humidity	70.0	720	< th	dose dependent	rect.	19	1
659	101.86	wind	1.0	10	< th	dose independent	rect.	22	8
672	101.91	precipitation	0.1	270	< th	dose independent	rect.	3	21
674	101.91	precipitation	0.1	270	< th	dose dependent	rect.	3	21
686	101.97	wind	1.0	10	< th	dose independent	rect.	17	13
713	102.09	wind	1.0	10	< th	dose independent	rect.	22	20
725	102.13	wind	1.0	10	< th	dose independent	rect.	22	18
751	102.21	humidity	50.0	90	> th	dose independent	rect.	5	20
782	102.30	wind	1.0	10	< th	dose independent	no	NA	NA
799	102.30	wind	1.0	10	< th	dose independent	rect.	17	23
822	102.34	wind	1.0	10	< th	dose independent	rect.	15	23
861	102.44	humidity	50.0	270	> th	dose independent	rect.	3	21
874	102.53	wind	3.0	10	< th	dose dependent	sin	7	NA
878	102.57	radiation	10.0	10	< th	dose independent	rect.	2	4
902	102.64	wind	1.0	10	< th	dose independent	rect.	13	23
903	102.64	temperature	10.0	720	> th	dose dependent	rect.	17	2
946	102.74	wind	3.0	10	< th	dose dependent	rect.	11	19
952	102.78	precipitation	0.1	10	< th	dose independent	rect.	2	4
962	102.78	precipitation	0.1	10	< th	dose dependent	rect.	2	4
963	102.79	temperature	30.0	1440	< th	dose independent	rect.	18	11
973	102.84	humidity	50.0	720	> th	dose dependent	rect.	19	5
997	102.96	precipitation	0.1	270	< th	dose independent	rect.	2	23
999	102.96	precipitation	0.1	270	< th	dose dependent	rect.	2	23