Os11g0195700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0195700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.08 | 0.438 | 3.35 | 0.0178 | 0.387 | -0.707 | -0.0343 | 2.92 | -0.143 | 9.28 | 22.41 | 4597 | -- | -- |
| 92.78 | 0.449 | 3.44 | -0.641 | 0.419 | -0.602 | 0.331 | -- | -0.226 | 8.23 | 19.24 | 8370 | -- | -- |
| 87.08 | 0.435 | 3.35 | 0.0348 | 0.387 | -0.713 | -- | 3.01 | -0.144 | 9.31 | 22.6 | 4613 | -- | -- |
| 90.95 | 0.444 | 3.44 | -0.675 | 0.397 | -0.646 | -- | -- | -0.256 | 9.04 | 16.7 | 7136 | -- | -- |
| 95.08 | 0.454 | 3.36 | 0.054 | -- | -0.748 | -- | 2.98 | -0.129 | -- | 22.59 | 5007 | -- | -- |
| 100.45 | 0.47 | 3.48 | -1.03 | 0.403 | -- | -0.00075 | -- | -0.451 | 9.36 | -- | -- | -- | -- |
| 100.45 | 0.469 | 3.48 | -1.03 | 0.403 | -- | -- | -- | -0.451 | 9.36 | -- | -- | -- | -- |
| 99.29 | 0.464 | 3.45 | -0.665 | -- | -0.688 | -- | -- | -0.259 | -- | 16.99 | 6544 | -- | -- |
| 96.78 | 0.458 | 3.4 | -- | 0.399 | -0.915 | -- | -- | -0.0898 | 9.46 | 11.74 | 25138 | -- | -- |
| 109.96 | 0.49 | 3.49 | -1.03 | -- | -- | -- | -- | -0.45 | -- | -- | -- | -- | -- |
| 128.52 | 0.53 | 3.46 | -- | 0.404 | -- | -- | -- | -0.336 | 9.56 | -- | -- | -- | -- |
| 105.14 | 0.478 | 3.41 | -- | -- | -0.937 | -- | -- | -0.0709 | -- | 10.5 | 25268 | -- | -- |
| 138.17 | 0.549 | 3.47 | -- | -- | -- | -- | -- | -0.335 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.65 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 2 | 82.73 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 3 | 82.78 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 6 | 83.02 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 9 | 83.08 | radiation | 30 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 10 | 83.10 | radiation | 1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 12 | 83.12 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 14 | 83.13 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 15 | 83.13 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 27 | 83.14 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 51 | 83.23 | radiation | 10 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 78 | 83.26 | radiation | 20 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 109 | 83.30 | radiation | 10 | 43200 | < th | dose independent | sin | 5 | NA |
| 153 | 83.36 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 213 | 83.44 | radiation | 1 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 316 | 83.52 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 375 | 83.57 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 396 | 83.58 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 397 | 83.58 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 401 | 83.58 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 22 |
| 402 | 83.58 | radiation | 1 | 43200 | > th | dose dependent | sin | 9 | NA |
| 438 | 83.61 | radiation | 20 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 444 | 83.61 | radiation | 40 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 447 | 83.62 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 471 | 83.62 | radiation | 20 | 43200 | < th | dose dependent | sin | 9 | NA |
| 511 | 83.64 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 573 | 83.66 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 594 | 83.67 | radiation | 10 | 43200 | < th | dose independent | no | NA | NA |
| 595 | 83.67 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 660 | 83.68 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 675 | 83.70 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 678 | 83.70 | radiation | 10 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 957 | 83.83 | radiation | 40 | 43200 | > th | dose dependent | rect. | 8 | 6 |