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Os11g0195600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Amino acid carrier (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0513) R2 : 0.471
β1 : -0.14 (0.176) R2dD : 0.00409 R2D : -0.0353
β2 : 1.16 (0.0785) R2dC : 0.249 R2C : 0.189
β3 : -8.81 (1.44) R2dE : 1.95 R2E : -2.17
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 37.6 (5.28) R2dD*E : 2.51 R2D*E : -1.9
γ1 : -0.485 (0.07) R2dN8 : 0.0709 R2N8 : -0.1
σ : 0.608
deviance : 170.26
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_____
C
peak time of C : 13.5
E
wheather : precipitation
threshold : 0.3944
memory length : 863
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
170.51 0.614 10.9 -0.383 1.16 -8.38 0.714 36 -0.495 13.5 0.3143 828 -- --
201.38 0.666 11.2 -1.03 1.11 2.68 0.659 -- -0.461 13.5 0.3143 828 -- --
170.26 0.608 10.9 -0.14 1.16 -8.81 -- 37.6 -0.485 13.5 0.3944 863 -- --
196.13 0.652 11.2 -1.17 1.12 1.4 -- -- -0.409 13.5 -0.1022 948 -- --
247.31 0.732 10.9 -0.143 -- -9.06 -- 36.9 -0.504 -- 0.4294 889 -- --
208.72 0.677 11.2 -1 1.09 -- 0.574 -- -0.467 13.5 -- -- -- --
210.02 0.679 11.2 -0.98 1.09 -- -- -- -0.464 13.6 -- -- -- --
271.79 0.768 11.2 -1.22 -- 1.16 -- -- -0.444 -- -0.0453 1256 -- --
229.82 0.706 11.1 -- 1.14 0.861 -- -- -0.317 13.6 -6.783e-07 924 -- --
283.22 0.786 11.2 -1.02 -- -- -- -- -0.488 -- -- -- -- --
235.34 0.718 11.1 -- 1.11 -- -- -- -0.355 13.6 -- -- -- --
307.77 0.82 11.2 -- -- 1.7 -- -- -0.367 -- 8.616e-07 1189 -- --
310.87 0.823 11.2 -- -- -- -- -- -0.374 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 155.22 radiation 30.0 14400 < th dose independent rect. 17 4
2 158.45 precipitation 0.1 270 < th dose independent rect. 14 15
3 158.45 precipitation 0.1 270 < th dose dependent rect. 14 15
4 158.83 humidity 60.0 14400 > th dose independent rect. 21 6
6 159.76 temperature 15.0 270 > th dose independent rect. 18 7
9 161.14 temperature 15.0 270 > th dose independent rect. 5 9
11 161.64 radiation 1.0 270 < th dose dependent rect. 5 21
13 162.04 precipitation 0.1 270 < th dose independent rect. 1 17
14 162.04 precipitation 0.1 270 < th dose dependent rect. 1 17
15 162.16 wind 9.0 270 < th dose independent rect. 5 9
16 162.25 temperature 15.0 270 > th dose independent rect. 19 18
22 162.66 radiation 10.0 14400 < th dose dependent rect. 21 6
27 163.09 wind 9.0 270 < th dose independent rect. 14 15
29 163.16 atmosphere 995.0 270 > th dose independent rect. 5 9
30 163.16 atmosphere 1015.0 270 < th dose independent rect. 5 9
31 163.16 temperature 10.0 270 > th dose independent rect. 14 15
36 163.68 precipitation 0.1 270 < th dose independent rect. 5 9
37 163.68 precipitation 0.1 270 < th dose dependent rect. 5 9
40 163.91 radiation 1.0 270 < th dose dependent rect. 11 14
41 163.93 temperature 15.0 270 > th dose independent rect. 7 17
42 164.00 precipitation 0.1 10 < th dose independent rect. 2 18
43 164.00 precipitation 0.1 10 < th dose dependent rect. 2 18
45 164.14 precipitation 0.1 10 < th dose independent rect. 16 15
46 164.14 precipitation 0.1 10 < th dose dependent rect. 16 15
48 164.32 radiation 1.0 270 < th dose dependent rect. 18 7
50 164.42 temperature 15.0 270 > th dose independent rect. 18 20
52 164.56 humidity 50.0 270 > th dose independent rect. 18 7
53 164.56 radiation 20.0 270 < th dose independent rect. 18 7
56 164.56 temperature 10.0 270 > th dose independent rect. 1 17
57 164.56 atmosphere 1015.0 270 < th dose independent rect. 1 17
60 164.61 radiation 40.0 270 < th dose dependent rect. 18 7
65 164.72 wind 9.0 270 < th dose independent rect. 18 7
68 164.80 atmosphere 995.0 270 > th dose independent rect. 18 7
77 165.16 radiation 40.0 270 < th dose independent rect. 14 15
85 165.46 temperature 15.0 270 > th dose independent rect. 6 19
86 165.49 wind 9.0 270 < th dose independent rect. 1 17
93 165.63 radiation 1.0 270 < th dose independent rect. 5 21
113 165.87 radiation 40.0 14400 < th dose independent rect. 16 15
115 165.92 humidity 70.0 14400 < th dose independent rect. 11 1
122 166.02 temperature 15.0 270 > th dose independent rect. 17 22
138 166.54 temperature 30.0 270 < th dose independent rect. 18 7
141 166.70 radiation 1.0 270 < th dose independent rect. 11 14
146 166.83 humidity 70.0 14400 < th dose independent rect. 16 3
147 166.83 temperature 15.0 270 > th dose independent rect. 5 21
154 166.94 radiation 30.0 14400 < th dose independent rect. 17 13
161 167.09 humidity 50.0 270 > th dose independent rect. 5 9
169 167.18 humidity 50.0 270 > th dose dependent rect. 18 7
171 167.19 humidity 70.0 14400 < th dose independent rect. 11 21
172 167.21 wind 7.0 270 < th dose independent rect. 19 18
176 167.28 radiation 20.0 14400 > th dose dependent rect. 16 2
194 167.42 radiation 20.0 43200 < th dose independent rect. 3 3
202 167.57 temperature 15.0 10 > th dose independent rect. 20 6
204 167.61 humidity 60.0 14400 > th dose independent rect. 3 4
211 167.70 humidity 70.0 14400 < th dose independent rect. 15 17
213 167.76 precipitation 0.1 270 < th dose independent rect. 24 7
214 167.76 humidity 70.0 14400 < th dose independent rect. 11 11
224 167.76 precipitation 0.1 270 < th dose dependent rect. 24 7
238 167.87 precipitation 0.1 270 < th dose independent rect. 18 7
239 167.87 precipitation 0.1 270 < th dose dependent rect. 18 7
243 167.92 wind 7.0 270 < th dose independent rect. 13 6
266 167.98 wind 1.0 270 > th dose independent rect. 13 6
277 168.10 humidity 70.0 14400 < th dose independent sin 15 NA
283 168.17 humidity 80.0 14400 < th dose dependent rect. 16 1
288 168.22 humidity 70.0 14400 > th dose independent rect. 11 21
290 168.24 temperature 10.0 270 > th dose independent rect. 13 6
292 168.24 atmosphere 1010.0 270 < th dose independent rect. 13 6
295 168.24 atmosphere 995.0 270 > th dose independent rect. 19 18
299 168.27 radiation 40.0 10 < th dose dependent rect. 2 18
356 168.55 wind 1.0 270 > th dose independent rect. 18 7
362 168.62 humidity 70.0 14400 > th dose independent rect. 15 17
376 168.67 humidity 70.0 14400 > th dose independent rect. 11 1
419 168.82 radiation 40.0 14400 > th dose dependent rect. 14 2
435 168.83 humidity 70.0 14400 > th dose independent rect. 16 3
438 168.85 precipitation 0.1 270 < th dose independent rect. 1 5
439 168.85 precipitation 0.1 270 < th dose dependent rect. 1 5
449 168.93 humidity 70.0 14400 > th dose independent rect. 11 12
459 168.95 precipitation 0.1 270 < th dose independent rect. 24 9
461 168.95 precipitation 0.1 270 < th dose dependent rect. 24 9
466 168.97 humidity 70.0 14400 > th dose independent sin 15 NA
492 169.19 humidity 50.0 270 > th dose independent rect. 19 18
493 169.22 precipitation 0.1 270 < th dose independent rect. 2 3
495 169.22 precipitation 0.1 270 < th dose dependent rect. 2 3
506 169.24 temperature 10.0 270 > th dose dependent rect. 5 8
529 169.31 humidity 80.0 14400 < th dose independent rect. 19 2
537 169.34 humidity 70.0 14400 > th dose independent rect. 15 8
601 169.50 wind 9.0 270 < th dose independent rect. 18 20
603 169.51 precipitation 0.1 270 < th dose independent rect. 13 6
604 169.51 precipitation 0.1 270 < th dose dependent rect. 13 6
618 169.54 humidity 80.0 14400 < th dose dependent rect. 14 8
623 169.56 atmosphere 995.0 270 > th dose independent rect. 1 17
639 169.59 humidity 70.0 14400 < th dose independent rect. 14 23
643 169.60 wind 9.0 270 < th dose dependent rect. 24 7
647 169.62 humidity 70.0 14400 < th dose independent no NA NA
649 169.62 humidity 70.0 14400 < th dose independent rect. 6 16
686 169.63 humidity 70.0 14400 < th dose independent rect. 21 23
689 169.65 humidity 70.0 14400 < th dose independent rect. 16 23
718 169.70 wind 9.0 270 < th dose dependent rect. 14 16
731 169.75 radiation 10.0 10 < th dose independent rect. 2 18
749 169.80 humidity 70.0 14400 > th dose dependent rect. 19 1
800 169.89 radiation 40.0 270 < th dose dependent rect. 24 9
808 169.92 wind 7.0 270 < th dose independent rect. 14 4
821 170.00 wind 9.0 10 < th dose independent rect. 7 9
830 170.01 humidity 70.0 14400 < th dose independent rect. 18 23
833 170.03 precipitation 0.1 270 < th dose independent rect. 3 1
834 170.03 precipitation 0.1 270 < th dose dependent rect. 3 1
852 170.08 radiation 1.0 270 < th dose dependent sin 16 NA
864 170.10 temperature 25.0 270 < th dose independent rect. 2 1
886 170.15 humidity 50.0 14400 > th dose dependent rect. 15 6
890 170.18 radiation 30.0 14400 > th dose independent rect. 16 1
935 170.28 wind 9.0 90 < th dose dependent rect. 16 15
946 170.32 humidity 90.0 720 > th dose dependent rect. 20 1
948 170.34 humidity 70.0 14400 > th dose independent rect. 14 23
955 170.35 humidity 70.0 14400 > th dose independent rect. 16 23
962 170.38 radiation 40.0 90 < th dose independent rect. 2 18
978 170.42 humidity 70.0 14400 > th dose independent no NA NA
980 170.42 humidity 70.0 14400 > th dose independent rect. 6 17