Os11g0195500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
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Os11g0195500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipase, class 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.94 | 0.318 | 11.2 | 0.491 | 1.3 | -0.86 | -0.411 | -2.33 | 0.213 | 14.3 | 1.16 | 10183 | -- | -- |
| 47.94 | 0.322 | 11.2 | 0.123 | 1.28 | -0.412 | -0.402 | -- | 0.132 | 14.1 | 4.658 | 13108 | -- | -- |
| 46.55 | 0.318 | 11.2 | 0.484 | 1.3 | -0.86 | -- | -2.34 | 0.216 | 14.3 | 1.08 | 10169 | -- | -- |
| 47.28 | 0.32 | 11.2 | 0.0347 | 1.3 | -0.463 | -- | -- | 0.0882 | 14.3 | 2.773 | 21738 | -- | -- |
| 90.98 | 0.447 | 11.2 | 0.112 | -- | -0.776 | -- | 0.335 | 0.198 | -- | 1.08 | 10169 | -- | -- |
| 52.73 | 0.34 | 11.2 | 0.207 | 1.32 | -- | -0.325 | -- | 0.241 | 14.2 | -- | -- | -- | -- |
| 53.12 | 0.341 | 11.2 | 0.198 | 1.32 | -- | -- | -- | 0.239 | 14.2 | -- | -- | -- | -- |
| 91.69 | 0.448 | 11.2 | 0.118 | -- | -0.774 | -- | -- | 0.2 | -- | 1.08 | 10169 | -- | -- |
| 47.1 | 0.32 | 11.2 | -- | 1.3 | -0.464 | -- | -- | 0.0735 | 14.3 | 3.135 | 21759 | -- | -- |
| 156.92 | 0.585 | 11.2 | 0.143 | -- | -- | -- | -- | 0.207 | -- | -- | -- | -- | -- |
| 54.15 | 0.344 | 11.2 | -- | 1.32 | -- | -- | -- | 0.217 | 14.2 | -- | -- | -- | -- |
| 92.05 | 0.448 | 11.2 | -- | -- | -0.775 | -- | -- | 0.187 | -- | 1.08 | 10169 | -- | -- |
| 157.46 | 0.586 | 11.2 | -- | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.01 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 5 | 45.02 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 12 | 45.08 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 23 | 45.08 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 11 |
| 24 | 45.32 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 25 | 45.34 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 26 | 45.35 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 35 | 45.38 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 123 | 45.49 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 154 | 45.51 | radiation | 1.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 198 | 45.55 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 228 | 45.58 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 229 | 45.58 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 232 | 45.59 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 237 | 45.59 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 277 | 45.61 | radiation | 1.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 301 | 45.63 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 342 | 45.64 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 346 | 45.64 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 22 | 5 |
| 347 | 45.64 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 350 | 45.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 362 | 45.65 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 363 | 45.65 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 378 | 45.67 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 394 | 45.67 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 22 | 9 |
| 407 | 45.68 | atmosphere | 1015.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 447 | 45.69 | atmosphere | 1015.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 471 | 45.69 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 8 | 22 |
| 474 | 45.69 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 475 | 45.69 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 488 | 45.70 | atmosphere | 1015.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 492 | 45.70 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 495 | 45.70 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 508 | 45.70 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 10 | 9 |
| 567 | 45.70 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 22 |
| 605 | 45.71 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 667 | 45.71 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 8 | 22 |
| 675 | 45.72 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 700 | 45.72 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 14 | 16 |
| 722 | 45.72 | atmosphere | 1015.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 725 | 45.72 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 1 | 4 |
| 747 | 45.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 764 | 45.73 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 14 | 16 |
| 807 | 45.74 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 847 | 45.74 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 912 | 45.75 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 918 | 45.75 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 2 | 22 |
| 956 | 45.76 | atmosphere | 1015.0 | 43200 | > th | dose independent | no | NA | NA |
| 959 | 45.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 987 | 45.76 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 999 | 45.76 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 7 | 21 |