Os11g0194400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0194400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.67 | 0.522 | 4.12 | -0.116 | 0.449 | -1.33 | -0.524 | -1.02 | -0.13 | 8.46 | 21.2 | 830 | -- | -- |
| 125.91 | 0.523 | 4.09 | 0.0909 | 0.488 | -1.16 | -0.261 | -- | -0.0498 | 8.31 | 22 | 979 | -- | -- |
| 124.33 | 0.519 | 4.12 | -0.0858 | 0.46 | -1.33 | -- | -0.856 | -0.119 | 8.27 | 21.2 | 851 | -- | -- |
| 125.51 | 0.522 | 4.08 | 0.0355 | 0.535 | -1.13 | -- | -- | -0.0315 | 8.05 | 22.21 | 1021 | -- | -- |
| 135.15 | 0.541 | 4.12 | -0.0345 | -- | -1.42 | -- | -0.784 | -0.0848 | -- | 21.27 | 769 | -- | -- |
| 178.45 | 0.626 | 4.16 | -0.342 | 0.661 | -- | -0.224 | -- | -0.414 | 8.99 | -- | -- | -- | -- |
| 178.62 | 0.626 | 4.16 | -0.35 | 0.662 | -- | -- | -- | -0.414 | 8.95 | -- | -- | -- | -- |
| 137.14 | 0.545 | 4.1 | 0.147 | -- | -1.34 | -- | -- | -0.0302 | -- | 21.5 | 809 | -- | -- |
| 125.54 | 0.522 | 4.08 | -- | 0.535 | -1.12 | -- | -- | -0.0379 | 8.05 | 22.23 | 1020 | -- | -- |
| 203.74 | 0.667 | 4.18 | -0.35 | -- | -- | -- | -- | -0.41 | -- | -- | -- | -- | -- |
| 181.84 | 0.631 | 4.16 | -- | 0.662 | -- | -- | -- | -0.375 | 8.99 | -- | -- | -- | -- |
| 137.19 | 0.546 | 4.09 | -- | -- | -1.17 | -- | -- | -0.00689 | -- | 22.2 | 780 | -- | -- |
| 206.97 | 0.671 | 4.17 | -- | -- | -- | -- | -- | -0.371 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 4 | 122.09 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 8 | 122.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 9 | 122.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 17 |
| 38 | 123.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 21 |
| 48 | 123.52 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 57 | 123.62 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 87 | 124.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 89 | 124.12 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 114 | 124.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 123 | 124.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 145 | 124.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 147 | 125.02 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 163 | 125.26 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 164 | 125.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 175 | 125.46 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 206 | 125.88 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 219 | 125.98 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 226 | 126.13 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 288 | 126.82 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 316 | 127.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 398 | 127.60 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 504 | 128.13 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 539 | 128.30 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 611 | 128.58 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 802 | 129.26 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 967 | 129.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |