Os11g0193800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0193800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.4 | 0.601 | 2.91 | -0.198 | 0.0256 | 7.54 | -0.587 | -12.7 | -0.0419 | 20.4 | 0.1 | 30 | 23 | 3 |
| 177.85 | 0.621 | 2.9 | -0.212 | 0.0306 | 3.63 | -0.655 | -- | -0.0627 | 21.7 | 0.4997 | 28 | 23.4 | 4.1 |
| 167.49 | 0.603 | 2.91 | -0.178 | 0.0276 | 7.52 | -- | -12.8 | -0.0424 | 21.4 | 0.07109 | 32 | 22.9 | 3.34 |
| 179.21 | 0.623 | 2.9 | -0.16 | 0.00213 | 3.24 | -- | -- | -0.0518 | 6.34 | 0.1807 | 32 | 23.7 | 3.37 |
| 167.53 | 0.603 | 2.91 | -0.178 | -- | 7.53 | -- | -12.8 | -0.0423 | -- | 0.07846 | 32 | 23.1 | 3.57 |
| 194.76 | 0.654 | 2.9 | -0.163 | 0.0849 | -- | -0.417 | -- | -0.0727 | 22.7 | -- | -- | -- | -- |
| 195.41 | 0.655 | 2.9 | -0.148 | 0.0929 | -- | -- | -- | -0.0724 | 0.313 | -- | -- | -- | -- |
| 175.59 | 0.617 | 2.9 | -0.157 | -- | 2.61 | -- | -- | -0.0518 | -- | 0.1853 | 31 | 23.8 | 3.65 |
| 178.27 | 0.622 | 2.89 | -- | 0.0145 | 3.42 | -- | -- | -0.0517 | 16.7 | 0.1836 | 33 | 23.8 | 3.02 |
| 195.95 | 0.654 | 2.9 | -0.145 | -- | -- | -- | -- | -0.071 | -- | -- | -- | -- | -- |
| 195.99 | 0.655 | 2.9 | -- | 0.0908 | -- | -- | -- | -0.056 | 0.227 | -- | -- | -- | -- |
| 167.37 | 0.603 | 2.89 | -- | -- | 2.81 | -- | -- | -0.032 | -- | 0.1949 | 33 | 23.9 | 2.07 |
| 196.5 | 0.654 | 2.9 | -- | -- | -- | -- | -- | -0.0549 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.40 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 23 | 3 |
| 3 | 166.40 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 23 | 3 |
| 17 | 171.85 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 27 | 171.85 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 41 | 171.96 | wind | 5.0 | 10 | > th | dose independent | rect. | 20 | 5 |
| 70 | 175.10 | wind | 5.0 | 10 | > th | dose dependent | rect. | 21 | 4 |
| 81 | 176.47 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 1 |
| 125 | 177.13 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 18 | 3 |
| 147 | 178.24 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 153 | 178.55 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 184 | 180.03 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 200 | 180.61 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 22 | 1 |
| 201 | 180.61 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 215 | 180.87 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 223 | 181.24 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 7 | 15 |
| 225 | 181.29 | humidity | 90.0 | 90 | > th | dose independent | rect. | 18 | 3 |
| 227 | 181.32 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 237 | 181.66 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 238 | 181.66 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 256 | 181.66 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 257 | 181.66 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 279 | 181.77 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 1 |
| 332 | 182.53 | wind | 7.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 379 | 183.00 | temperature | 20.0 | 90 | < th | dose independent | rect. | 6 | 4 |
| 383 | 183.08 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 6 | 3 |
| 386 | 183.11 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 2 | 2 |
| 387 | 183.11 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 2 |
| 397 | 183.20 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 18 | 4 |
| 453 | 183.67 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 459 | 183.70 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 1 |
| 462 | 183.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 494 | 183.89 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 1 |
| 503 | 183.90 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 19 | 1 |
| 527 | 183.96 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 535 | 184.00 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 544 | 184.02 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 548 | 184.03 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 557 | 184.03 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 567 | 184.08 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 577 | 184.08 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 595 | 184.11 | wind | 7.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 620 | 184.23 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 10 |
| 629 | 184.26 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 11 | 7 |
| 646 | 184.35 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 664 | 184.43 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 3 | 12 |
| 667 | 184.46 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 691 | 184.53 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 3 | 15 |
| 692 | 184.54 | wind | 5.0 | 30 | > th | dose dependent | rect. | 17 | 8 |
| 720 | 184.60 | wind | 5.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 724 | 184.62 | wind | 9.0 | 30 | > th | dose independent | rect. | 21 | 5 |
| 746 | 184.62 | wind | 9.0 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 777 | 184.65 | wind | 9.0 | 90 | > th | dose dependent | rect. | 18 | 4 |
| 826 | 184.78 | temperature | 15.0 | 4320 | > th | dose independent | sin | 0 | NA |
| 827 | 184.78 | temperature | 15.0 | 4320 | < th | dose independent | sin | 0 | NA |
| 831 | 184.79 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 894 | 184.98 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 7 |
| 925 | 185.00 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 7 |