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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0191800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.15 (0.0134) R2 : 0.000548
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0141 (0.0282) R2dN8 : 0.000708 R2N8 : 0.000548
σ : 0.252
deviance : 29.26
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.01 0.244 3.05 0.974 0.096 -0.635 -0.169 5.04 0.0113 5.93 30.4 2696 -- --
28.41 0.25 3.15 0.0648 0.117 0.054 -0.0666 -- 0.0238 6.63 30.4 2696 -- --
27.04 0.242 3.05 0.959 0.0988 -0.624 -- 4.96 0.0132 6.9 30.39 2694 -- --
28.41 0.248 3.15 0.0858 0.11 -0.0491 -- -- 0.00971 6.32 30.5 2522 -- --
27.54 0.244 3.05 0.994 -- -0.643 -- 5.15 0.0152 -- 30.3 2694 -- --
28.48 0.25 3.15 0.0701 0.11 -- -0.0573 -- 0.0198 6.92 -- -- -- --
28.49 0.25 3.15 0.0694 0.11 -- -- -- 0.0201 7.19 -- -- -- --
28.91 0.25 3.15 0.0957 -- -0.0761 -- -- 0.0356 -- 28.49 1780 -- --
28.41 0.248 3.15 -- 0.121 -0.0647 -- -- 0.0207 6.86 30.5 7338 -- --
29.12 0.252 3.15 0.0714 -- -- -- -- 0.022 -- -- -- -- --
28.61 0.25 3.15 -- 0.11 -- -- -- 0.0124 7.15 -- -- -- --
29.03 0.251 3.15 -- -- -0.0733 -- -- 0.0237 -- 30.4 7698 -- --
29.26 0.252 3.15 -- -- -- -- -- 0.0141 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.75 temperature 15.0 1440 > th dose independent rect. 21 1
2 25.83 atmosphere 995.0 30 > th dose independent rect. 21 23
4 25.95 wind 9.0 1440 < th dose independent rect. 21 1
5 25.98 temperature 15.0 30 > th dose independent rect. 21 23
6 25.99 radiation 20.0 43200 < th dose dependent rect. 21 1
20 26.04 temperature 30.0 1440 < th dose independent rect. 21 1
24 26.04 humidity 50.0 1440 > th dose independent rect. 21 1
30 26.04 atmosphere 995.0 1440 > th dose independent rect. 21 1
31 26.04 radiation 1.0 1440 < th dose independent rect. 21 1
51 26.04 temperature 10.0 1440 > th dose independent rect. 22 23
54 26.05 wind 3.0 30 > th dose independent rect. 20 1
55 26.05 temperature 25.0 30 > th dose independent rect. 20 1
57 26.06 humidity 80.0 30 > th dose independent rect. 20 1
59 26.07 temperature 20.0 30 > th dose dependent rect. 20 1
61 26.07 atmosphere 1005.0 30 > th dose dependent rect. 20 1
67 26.10 humidity 90.0 30 < th dose independent rect. 20 1
68 26.10 atmosphere 1005.0 30 > th dose independent rect. 20 1
69 26.10 wind 1.0 30 > th dose dependent rect. 20 1
71 26.10 humidity 60.0 30 > th dose dependent rect. 20 1
75 26.11 wind 5.0 30 < th dose independent rect. 20 1
78 26.11 temperature 10.0 30 > th dose independent rect. 20 1
81 26.11 temperature 30.0 30 < th dose independent rect. 20 1
82 26.11 humidity 50.0 30 > th dose independent rect. 20 1
85 26.11 atmosphere 995.0 30 > th dose independent rect. 20 1
86 26.11 atmosphere 1010.0 30 < th dose independent rect. 20 1
88 26.11 radiation 1.0 30 < th dose independent rect. 20 1
93 26.11 precipitation 0.1 30 < th dose independent rect. 20 1
96 26.11 radiation 1.0 30 < th dose dependent rect. 20 1
102 26.11 precipitation 0.1 30 < th dose dependent rect. 20 1
105 26.13 wind 9.0 30 < th dose independent rect. 21 23
106 26.13 wind 9.0 30 < th dose dependent rect. 20 1
110 26.17 atmosphere 1015.0 30 < th dose dependent rect. 20 1
115 26.20 humidity 90.0 30 < th dose dependent rect. 20 1
120 26.22 temperature 30.0 30 < th dose dependent rect. 20 1
161 26.40 humidity 90.0 10 < th dose independent rect. 3 2
165 26.50 atmosphere 995.0 30 > th dose independent rect. 10 10
172 26.58 humidity 80.0 14400 < th dose dependent rect. 1 8
180 26.66 wind 7.0 14400 < th dose dependent rect. 10 2
181 26.68 atmosphere 1005.0 10 > th dose dependent rect. 4 1
187 26.70 temperature 15.0 1440 > th dose independent rect. 11 10
189 26.70 wind 1.0 14400 > th dose dependent rect. 10 2
191 26.71 wind 7.0 14400 < th dose independent rect. 9 1
200 26.74 wind 5.0 14400 < th dose independent rect. 11 1
208 26.79 wind 1.0 30 > th dose independent rect. 4 1
209 26.79 precipitation 0.1 1440 < th dose independent rect. 21 1
211 26.79 atmosphere 995.0 30 > th dose independent rect. 10 23
212 26.79 precipitation 0.1 30 < th dose independent rect. 21 23
214 26.79 precipitation 0.1 1440 < th dose dependent rect. 21 1
217 26.79 precipitation 0.1 30 < th dose dependent rect. 21 23
222 26.81 humidity 90.0 10 < th dose dependent rect. 3 2
227 26.83 wind 5.0 14400 > th dose independent rect. 11 1
231 26.83 atmosphere 1000.0 720 > th dose independent rect. 21 14
235 26.85 temperature 25.0 90 > th dose independent rect. 8 2
237 26.85 atmosphere 1005.0 30 > th dose dependent rect. 2 3
239 26.86 temperature 25.0 10 > th dose independent rect. 8 2
264 26.91 temperature 30.0 720 < th dose independent rect. 9 12
265 26.91 temperature 15.0 30 > th dose independent rect. 20 14
269 26.92 wind 7.0 14400 > th dose independent rect. 9 1
270 26.92 radiation 20.0 90 > th dose independent rect. 8 1
271 26.92 precipitation 0.1 10 < th dose independent rect. 10 10
272 26.92 wind 7.0 30 < th dose independent rect. 20 14
276 26.92 precipitation 0.1 10 < th dose dependent rect. 10 10
292 26.95 wind 9.0 30 < th dose independent rect. 10 10
293 26.95 temperature 10.0 30 > th dose independent rect. 10 10
298 26.95 atmosphere 1015.0 30 < th dose independent rect. 10 10
300 26.95 temperature 10.0 1440 > th dose independent rect. 21 14
303 26.95 humidity 50.0 30 > th dose independent rect. 20 14
304 26.95 atmosphere 995.0 30 > th dose independent rect. 20 14
313 26.96 atmosphere 1000.0 720 > th dose independent rect. 23 10
320 26.97 wind 5.0 14400 > th dose independent rect. 9 6
328 26.98 wind 1.0 10 > th dose independent rect. 10 10
330 26.98 radiation 40.0 30 < th dose independent rect. 21 23
339 26.99 precipitation 0.1 30 < th dose independent rect. 20 14
345 26.99 precipitation 0.1 30 < th dose dependent rect. 20 14
360 27.02 wind 7.0 720 < th dose independent rect. 17 12
362 27.02 wind 1.0 30 > th dose dependent rect. 4 1
369 27.03 humidity 90.0 30 < th dose independent rect. 9 1
370 27.03 radiation 20.0 90 > th dose independent rect. 7 3
389 27.03 temperature 30.0 10 < th dose dependent rect. 4 1
391 27.04 radiation 40.0 30 < th dose independent sin 12 NA
392 27.04 temperature 30.0 1440 < th dose independent rect. 15 20
399 27.05 atmosphere 1000.0 720 > th dose independent rect. 21 12
400 27.05 temperature 30.0 1440 > th dose independent rect. 15 20
402 27.05 temperature 30.0 1440 > th dose dependent rect. 15 1
404 27.06 radiation 40.0 30 > th dose independent sin 12 NA
445 27.07 humidity 90.0 30 < th dose dependent rect. 20 14
458 27.08 radiation 1.0 90 > th dose dependent rect. 8 1
468 27.09 radiation 1.0 90 > th dose dependent rect. 7 3
479 27.10 radiation 30.0 90 > th dose independent rect. 13 21
483 27.11 temperature 30.0 720 < th dose independent rect. 11 10
486 27.11 humidity 90.0 30 < th dose dependent rect. 9 1
505 27.12 wind 5.0 10 < th dose independent rect. 4 1
507 27.12 humidity 70.0 14400 > th dose independent rect. 8 1
509 27.12 humidity 60.0 43200 < th dose independent rect. 11 1
510 27.12 atmosphere 1005.0 10 > th dose independent rect. 4 1
530 27.12 atmosphere 995.0 30 > th dose dependent rect. 10 10
539 27.13 temperature 30.0 1440 < th dose independent sin 12 NA
541 27.13 temperature 25.0 10 > th dose independent rect. 4 1
545 27.13 precipitation 0.1 4320 > th dose independent rect. 20 2
547 27.13 humidity 80.0 90 < th dose independent rect. 7 3
554 27.13 temperature 30.0 30 < th dose independent rect. 20 14
555 27.13 atmosphere 1015.0 30 < th dose independent rect. 20 14
556 27.13 temperature 30.0 1440 < th dose independent rect. 15 15
557 27.13 temperature 30.0 720 < th dose independent rect. 2 19
562 27.13 temperature 15.0 10 > th dose independent rect. 5 23
564 27.13 temperature 25.0 90 > th dose dependent rect. 4 1
565 27.13 precipitation 0.1 4320 > th dose dependent rect. 21 1
572 27.14 temperature 25.0 90 > th dose independent rect. 4 1
578 27.14 temperature 30.0 1440 < th dose independent rect. 15 10
579 27.14 atmosphere 1000.0 10 > th dose independent rect. 8 12
589 27.14 precipitation 0.1 4320 > th dose dependent rect. 20 3
599 27.15 temperature 10.0 10 > th dose independent rect. 4 1
602 27.15 temperature 30.0 10 < th dose independent rect. 4 1
603 27.15 humidity 50.0 10 > th dose independent rect. 4 1
607 27.15 atmosphere 995.0 10 > th dose independent rect. 4 1
608 27.15 atmosphere 1010.0 10 < th dose independent rect. 4 1
611 27.15 radiation 1.0 10 < th dose independent rect. 4 1
621 27.15 temperature 30.0 1440 > th dose independent rect. 15 4
656 27.15 radiation 1.0 10 < th dose dependent rect. 4 1
688 27.16 precipitation 0.1 10 < th dose independent rect. 4 1
700 27.16 temperature 30.0 1440 < th dose independent rect. 15 7
732 27.16 precipitation 0.1 10 < th dose dependent rect. 4 1
741 27.17 precipitation 0.1 1440 < th dose independent rect. 10 1
742 27.17 temperature 15.0 720 > th dose independent rect. 13 4
743 27.17 temperature 30.0 1440 < th dose independent rect. 15 4
749 27.17 wind 9.0 10 < th dose dependent rect. 9 1
751 27.17 precipitation 0.1 1440 < th dose dependent rect. 10 1
757 27.18 temperature 30.0 1440 > th dose independent sin 12 NA
760 27.18 temperature 10.0 43200 > th dose independent rect. 10 1
768 27.18 wind 5.0 14400 > th dose independent rect. 24 17
769 27.18 wind 5.0 14400 < th dose independent rect. 24 17
772 27.18 radiation 40.0 270 < th dose independent rect. 9 20
773 27.18 humidity 50.0 30 > th dose independent rect. 21 23
774 27.18 wind 9.0 10 < th dose dependent rect. 4 1
776 27.18 temperature 10.0 30 > th dose dependent rect. 4 1
783 27.18 humidity 90.0 30 < th dose dependent rect. 5 5
792 27.19 temperature 10.0 1440 > th dose independent rect. 10 1
801 27.19 atmosphere 995.0 1440 > th dose independent rect. 10 1
825 27.19 precipitation 0.1 14400 > th dose independent rect. 24 11
828 27.19 radiation 10.0 720 > th dose independent rect. 17 16
833 27.19 temperature 10.0 1440 > th dose independent rect. 11 23
871 27.20 humidity 70.0 14400 < th dose independent rect. 8 1
875 27.20 radiation 20.0 720 > th dose independent rect. 7 2
903 27.20 precipitation 0.1 14400 < th dose independent rect. 24 11
925 27.20 wind 9.0 30 < th dose independent rect. 10 23
928 27.20 temperature 10.0 30 > th dose dependent rect. 9 1
929 27.20 humidity 50.0 30 > th dose dependent rect. 4 1
945 27.20 precipitation 0.1 14400 < th dose dependent rect. 24 11
955 27.21 wind 7.0 30 < th dose independent rect. 9 1
957 27.21 temperature 10.0 30 > th dose independent rect. 9 1
959 27.21 humidity 50.0 30 > th dose independent rect. 9 1
961 27.21 atmosphere 995.0 30 > th dose independent rect. 9 1
963 27.21 atmosphere 1015.0 30 < th dose independent rect. 9 1
966 27.21 precipitation 0.1 30 < th dose independent rect. 9 1