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Os11g0191300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MEI1 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.38 (0.0207) R2 : 0.333
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.658 (0.0436) R2dN8 : 0.43 R2N8 : 0.333
σ : 0.39
deviance : 69.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.24 0.323 9.37 0.432 0.529 0.507 0.242 -0.186 0.761 23.4 73 1242 -- --
47.28 0.32 9.37 0.405 0.546 0.517 0.269 -- 0.756 23.4 73 1195 -- --
47.42 0.321 9.37 0.432 0.549 0.512 -- -0.305 0.765 23.4 72.88 1195 -- --
47.58 0.321 9.38 0.391 0.556 0.506 -- -- 0.75 23.4 72.97 1195 -- --
59.71 0.36 9.36 0.376 -- 0.446 -- 0.0355 0.751 -- 72 1546 -- --
55.72 0.35 9.39 0.305 0.431 -- 0.191 -- 0.689 23 -- -- -- --
55.87 0.35 9.39 0.297 0.43 -- -- -- 0.688 23 -- -- -- --
59.66 0.36 9.37 0.389 -- 0.48 -- -- 0.746 -- 72 1551 -- --
51.51 0.334 9.39 -- 0.551 0.45 -- -- 0.701 23.4 72.21 1184 -- --
67.37 0.384 9.38 0.307 -- -- -- -- 0.692 -- -- -- -- --
58.19 0.357 9.39 -- 0.432 -- -- -- 0.655 23.1 -- -- -- --
63.37 0.371 9.38 -- -- 0.436 -- -- 0.751 -- 72.14 8777 -- --
69.85 0.39 9.38 -- -- -- -- -- 0.658 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.05 humidity 50.0 720 > th dose dependent rect. 18 1
3 45.18 radiation 1.0 720 < th dose dependent rect. 18 1
5 45.60 temperature 30.0 720 < th dose independent rect. 18 1
7 45.91 humidity 70.0 720 > th dose independent rect. 18 1
8 45.95 humidity 60.0 14400 < th dose independent rect. 16 4
21 45.99 humidity 60.0 14400 > th dose independent rect. 17 4
22 45.99 humidity 60.0 14400 > th dose independent rect. 17 6
26 46.00 humidity 60.0 14400 > th dose independent rect. 17 13
29 46.01 humidity 60.0 14400 > th dose independent rect. 17 11
35 46.10 humidity 60.0 14400 < th dose dependent rect. 16 17
37 46.17 humidity 60.0 14400 < th dose independent rect. 17 1
52 46.25 humidity 70.0 14400 < th dose dependent rect. 17 4
69 46.42 radiation 1.0 720 < th dose independent rect. 18 1
121 46.87 temperature 30.0 30 < th dose dependent rect. 7 23
128 47.00 humidity 50.0 14400 > th dose independent rect. 16 19
142 47.09 humidity 60.0 1440 > th dose dependent rect. 11 1
143 47.12 humidity 80.0 43200 < th dose independent rect. 22 1
163 47.33 temperature 10.0 720 > th dose dependent rect. 19 5
166 47.34 precipitation 0.1 43200 > th dose dependent rect. 19 2
167 47.39 temperature 10.0 720 > th dose dependent rect. 12 19
169 47.41 humidity 60.0 14400 < th dose independent sin 12 NA
170 47.42 humidity 50.0 14400 < th dose independent rect. 16 19
174 47.50 humidity 80.0 43200 > th dose independent rect. 22 1
196 47.63 radiation 20.0 4320 > th dose dependent rect. 16 16
197 47.65 radiation 10.0 43200 < th dose dependent rect. 9 1
216 47.72 temperature 10.0 90 > th dose dependent rect. 19 23
218 47.72 humidity 50.0 30 > th dose dependent rect. 7 23
219 47.73 wind 3.0 43200 > th dose independent rect. 5 1
225 47.76 temperature 30.0 720 < th dose independent rect. 17 11
226 47.77 humidity 60.0 14400 > th dose independent sin 13 NA
227 47.77 wind 3.0 43200 < th dose independent rect. 5 1
240 47.78 humidity 70.0 14400 < th dose dependent sin 12 NA
256 47.81 wind 3.0 43200 > th dose independent rect. 4 3
261 47.83 temperature 30.0 14400 > th dose dependent rect. 17 1
264 47.84 humidity 80.0 1440 < th dose independent rect. 11 1
294 47.89 precipitation 0.1 720 < th dose independent rect. 19 23
295 47.89 precipitation 0.1 720 < th dose dependent rect. 19 23
297 47.90 wind 3.0 43200 > th dose dependent rect. 17 15
323 47.97 humidity 80.0 1440 > th dose independent rect. 11 1
324 47.97 radiation 30.0 4320 < th dose independent rect. 19 13
336 48.00 temperature 15.0 1440 > th dose dependent rect. 11 3
353 48.02 precipitation 0.1 43200 > th dose independent rect. 19 2
355 48.02 humidity 70.0 1440 > th dose independent rect. 15 6
360 48.02 humidity 70.0 1440 > th dose independent rect. 15 13
384 48.03 temperature 30.0 720 < th dose dependent rect. 18 1
392 48.05 temperature 30.0 720 < th dose independent rect. 16 13
393 48.05 wind 7.0 43200 < th dose dependent rect. 5 2
398 48.07 temperature 30.0 14400 > th dose independent rect. 17 1
402 48.07 wind 5.0 43200 > th dose dependent rect. 19 3
405 48.09 wind 1.0 43200 > th dose dependent rect. 5 2
408 48.10 wind 9.0 43200 > th dose independent rect. 20 3
419 48.11 radiation 30.0 4320 < th dose independent rect. 3 5
430 48.11 temperature 30.0 14400 > th dose dependent sin 12 NA
438 48.11 humidity 50.0 720 > th dose dependent rect. 7 21
439 48.11 radiation 1.0 720 < th dose dependent rect. 22 21
467 48.13 humidity 50.0 720 > th dose dependent rect. 7 14
473 48.14 humidity 70.0 1440 > th dose independent sin 14 NA
494 48.17 wind 3.0 43200 > th dose dependent sin 11 NA
495 48.17 humidity 90.0 1440 < th dose dependent rect. 11 2
500 48.18 temperature 30.0 14400 < th dose independent rect. 17 7
501 48.18 temperature 30.0 14400 < th dose independent rect. 17 14
505 48.19 temperature 30.0 14400 < th dose independent rect. 17 3
511 48.19 temperature 30.0 14400 < th dose independent rect. 17 11
515 48.19 radiation 20.0 4320 > th dose dependent rect. 6 2
532 48.20 temperature 30.0 14400 < th dose independent rect. 17 1
544 48.21 precipitation 0.1 43200 < th dose independent rect. 19 2
547 48.21 radiation 30.0 4320 < th dose independent rect. 22 10
550 48.21 humidity 80.0 14400 > th dose dependent rect. 21 1
552 48.21 precipitation 0.1 43200 < th dose dependent rect. 19 2
596 48.24 wind 5.0 43200 < th dose independent rect. 17 14
606 48.25 wind 5.0 43200 > th dose independent rect. 19 3
610 48.25 wind 5.0 43200 < th dose independent rect. 16 18
611 48.25 wind 9.0 43200 > th dose dependent rect. 20 2
618 48.25 temperature 30.0 10 < th dose dependent rect. 18 20
622 48.26 wind 9.0 43200 < th dose independent rect. 20 3
628 48.26 humidity 70.0 14400 > th dose dependent rect. 18 1
635 48.28 wind 9.0 43200 < th dose dependent sin 5 NA
636 48.28 precipitation 0.1 43200 > th dose dependent rect. 17 3
639 48.28 wind 9.0 43200 < th dose dependent rect. 20 11
673 48.30 wind 5.0 43200 < th dose independent rect. 19 3
677 48.30 temperature 10.0 1440 > th dose dependent rect. 13 1
688 48.31 wind 5.0 43200 > th dose independent rect. 17 14
690 48.31 wind 5.0 43200 > th dose independent rect. 16 18
692 48.31 wind 5.0 43200 > th dose dependent rect. 20 1
705 48.32 temperature 30.0 43200 > th dose dependent rect. 10 1
709 48.32 wind 1.0 43200 > th dose dependent rect. 20 11
728 48.33 wind 9.0 43200 < th dose dependent sin 9 NA
746 48.33 wind 9.0 43200 < th dose dependent rect. 1 13
757 48.34 temperature 30.0 43200 > th dose independent rect. 9 1
758 48.34 temperature 30.0 43200 < th dose independent rect. 9 1
775 48.34 temperature 15.0 10 > th dose dependent rect. 23 23
784 48.35 temperature 30.0 43200 < th dose independent rect. 5 6
797 48.35 temperature 30.0 43200 < th dose independent rect. 23 12
804 48.35 temperature 30.0 43200 < th dose independent rect. 19 15
847 48.36 wind 1.0 43200 > th dose dependent sin 5 NA
853 48.36 humidity 80.0 14400 > th dose dependent rect. 19 3
876 48.37 radiation 1.0 720 < th dose dependent rect. 5 14
914 48.39 wind 5.0 43200 < th dose independent sin 12 NA
952 48.40 wind 1.0 43200 > th dose dependent sin 9 NA
977 48.40 wind 9.0 43200 < th dose dependent rect. 19 18
996 48.41 wind 7.0 43200 < th dose dependent rect. 4 6