Os11g0189900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0189900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.6 | 0.481 | 8.66 | -2.52 | 0.813 | -1.5 | -0.0648 | 0.0202 | 0.0318 | 2.06 | 24.8 | 211 | -- | -- |
| 102.99 | 0.473 | 8.65 | -2.54 | 0.763 | -1.73 | -0.131 | -- | 0.0688 | 1.72 | 22.9 | 218 | -- | -- |
| 102.4 | 0.471 | 8.64 | -2.42 | 0.799 | -1.84 | -- | -0.707 | 0.117 | 1.89 | 22.79 | 196 | -- | -- |
| 102.91 | 0.472 | 8.65 | -2.53 | 0.772 | -1.72 | -- | -- | 0.0921 | 1.88 | 22.96 | 214 | -- | -- |
| 124.14 | 0.519 | 8.62 | -2.53 | -- | -1.69 | -- | -0.268 | 0.0875 | -- | 22.9 | 853 | -- | -- |
| 136.97 | 0.549 | 8.59 | -2.14 | 0.607 | -- | -0.0567 | -- | 0.322 | 1.67 | -- | -- | -- | -- |
| 136.98 | 0.548 | 8.59 | -2.13 | 0.607 | -- | -- | -- | 0.322 | 1.68 | -- | -- | -- | -- |
| 123.81 | 0.518 | 8.65 | -2.55 | -- | -1.63 | -- | -- | 0.0634 | -- | 23.22 | 866 | -- | -- |
| 250.94 | 0.742 | 8.56 | -- | 0.665 | -0.68 | -- | -- | 0.488 | 1.45 | 22.9 | 151 | -- | -- |
| 159.46 | 0.59 | 8.59 | -2.11 | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
| 257.01 | 0.75 | 8.54 | -- | 0.569 | -- | -- | -- | 0.56 | 1.57 | -- | -- | -- | -- |
| 273.57 | 0.77 | 8.55 | -- | -- | -0.428 | -- | -- | 0.494 | -- | 24.96 | 790 | -- | -- |
| 276.83 | 0.777 | 8.53 | -- | -- | -- | -- | -- | 0.569 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 101.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 3 | 101.18 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 4 | 101.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 5 | 101.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 6 | 101.78 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 8 | 102.57 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 9 | 102.80 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 12 | 103.02 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 16 | 103.42 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 21 | 103.60 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 24 | 103.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 26 | 103.89 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 34 | 104.19 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 38 | 104.48 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 42 | 104.65 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 50 | 104.84 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 57 | 105.02 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 58 | 105.03 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 61 | 105.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 64 | 105.11 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 66 | 105.13 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 69 | 105.15 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 70 | 105.18 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 82 | 105.33 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 101 | 105.51 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 113 | 105.56 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 140 | 105.82 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 142 | 105.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 144 | 105.84 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 145 | 105.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 146 | 105.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 149 | 105.86 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 150 | 105.87 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 164 | 105.96 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 165 | 105.98 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 166 | 105.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 167 | 105.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 170 | 106.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 171 | 106.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 180 | 106.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 185 | 106.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 203 | 106.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 206 | 106.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 207 | 106.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 221 | 106.38 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 227 | 106.41 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 228 | 106.41 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 238 | 106.45 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 241 | 106.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 260 | 106.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 15 |
| 275 | 106.61 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 306 | 106.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 320 | 106.79 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 325 | 106.81 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 329 | 106.82 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 334 | 106.84 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 335 | 106.84 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 7 |
| 340 | 106.86 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 354 | 106.93 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 397 | 107.12 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 440 | 107.32 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 459 | 107.41 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 465 | 107.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 474 | 107.46 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 475 | 107.47 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 483 | 107.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 499 | 107.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 535 | 107.70 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 552 | 107.76 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 572 | 107.83 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 574 | 107.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 576 | 107.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 580 | 107.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 587 | 107.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 594 | 107.92 | temperature | 20.0 | 90 | > th | dose independent | rect. | 17 | 23 |
| 597 | 107.93 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 601 | 107.94 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 665 | 108.23 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 667 | 108.23 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 689 | 108.29 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 690 | 108.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 703 | 108.33 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 767 | 108.54 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 771 | 108.56 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 782 | 108.58 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 785 | 108.59 | temperature | 20.0 | 10 | < th | dose independent | rect. | 16 | 21 |
| 791 | 108.60 | temperature | 20.0 | 10 | < th | dose independent | rect. | 14 | 23 |
| 804 | 108.64 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 807 | 108.65 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 810 | 108.66 | temperature | 20.0 | 270 | < th | dose independent | rect. | 8 | 22 |
| 819 | 108.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 834 | 108.72 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 890 | 108.85 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 930 | 108.94 | temperature | 20.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 944 | 108.96 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 23 |
| 958 | 108.99 | temperature | 20.0 | 90 | > th | dose independent | no | NA | NA |
| 974 | 109.02 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 979 | 109.03 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 980 | 109.04 | temperature | 20.0 | 10 | < th | dose independent | no | NA | NA |
| 981 | 109.04 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 984 | 109.05 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 994 | 109.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 998 | 109.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |