Os11g0189600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cycloartenol synthase.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0189600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cycloartenol synthase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 282.88 | 0.79 | 5.8 | 5.77 | 1.33 | -2.8 | 1.71 | -10.9 | 1.57 | 1.36 | 0.1508 | 4392 | -- | -- |
| 341.72 | 0.868 | 6.04 | 4.33 | 0.878 | 0.323 | 0.93 | -- | 1.38 | 2.39 | 10.07 | 11106 | -- | -- |
| 286.17 | 0.788 | 5.79 | 5.89 | 1.04 | -2.57 | -- | -10.9 | 1.63 | 1.47 | 0.2081 | 4284 | -- | -- |
| 323.68 | 0.838 | 6.1 | 4.34 | 1.08 | -0.842 | -- | -- | 1.13 | 2.06 | 11.67 | 12692 | -- | -- |
| 333.75 | 0.851 | 5.78 | 5.64 | -- | -2.92 | -- | -10.7 | 1.59 | -- | 0.1699 | 4204 | -- | -- |
| 343.83 | 0.869 | 6.04 | 4.34 | 1.17 | -- | 1.03 | -- | 1.38 | 1.69 | -- | -- | -- | -- |
| 347.9 | 0.873 | 6.05 | 4.31 | 1.18 | -- | -- | -- | 1.37 | 1.83 | -- | -- | -- | -- |
| 362.06 | 0.89 | 6.03 | 4.33 | -- | 0.865 | -- | -- | 1.4 | -- | 11.67 | 12692 | -- | -- |
| 814.21 | 1.33 | 6.21 | -- | 1.22 | -0.738 | -- | -- | 0.653 | 1.81 | 14.66 | 12956 | -- | -- |
| 432.04 | 0.971 | 6.03 | 4.36 | -- | -- | -- | -- | 1.4 | -- | -- | -- | -- | -- |
| 836.79 | 1.35 | 6.15 | -- | 1.26 | -- | -- | -- | 0.892 | 1.92 | -- | -- | -- | -- |
| 805.38 | 1.32 | 6.14 | -- | -- | 2.28 | -- | -- | 0.927 | -- | 92.79 | 47520 | -- | -- |
| 932.39 | 1.43 | 6.14 | -- | -- | -- | -- | -- | 0.915 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.28 | humidity | 70 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 4 | 268.40 | humidity | 70 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 6 | 269.42 | humidity | 70 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 11 | 271.69 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 27 | 271.69 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 43 | 271.94 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 45 | 273.19 | temperature | 20 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 52 | 274.88 | humidity | 90 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 54 | 275.25 | temperature | 20 | 14400 | < th | dose dependent | rect. | 6 | 15 |
| 56 | 275.35 | temperature | 20 | 14400 | < th | dose dependent | sin | 22 | NA |
| 57 | 275.41 | temperature | 20 | 14400 | < th | dose dependent | sin | 20 | NA |
| 59 | 275.41 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 17 |
| 74 | 276.22 | temperature | 15 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 78 | 276.44 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 126 | 277.79 | temperature | 20 | 14400 | < th | dose dependent | rect. | 11 | 10 |
| 139 | 278.09 | temperature | 20 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 151 | 278.34 | temperature | 20 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 163 | 278.65 | temperature | 15 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 175 | 278.83 | temperature | 15 | 14400 | > th | dose independent | rect. | 2 | 19 |
| 178 | 278.89 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 190 | 279.07 | temperature | 20 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 250 | 279.66 | temperature | 15 | 14400 | > th | dose independent | rect. | 4 | 17 |
| 257 | 279.76 | temperature | 15 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 270 | 279.86 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 288 | 280.03 | temperature | 15 | 14400 | > th | dose independent | sin | 13 | NA |
| 304 | 280.09 | temperature | 15 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 323 | 280.20 | temperature | 15 | 14400 | > th | dose independent | no | NA | NA |
| 329 | 280.24 | temperature | 15 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 331 | 280.26 | temperature | 15 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 349 | 280.43 | temperature | 15 | 14400 | < th | dose independent | rect. | 2 | 19 |
| 351 | 280.44 | temperature | 15 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 352 | 280.45 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 366 | 280.53 | temperature | 15 | 14400 | < th | dose independent | rect. | 2 | 16 |
| 370 | 280.55 | temperature | 15 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 371 | 280.55 | temperature | 15 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 377 | 280.58 | temperature | 15 | 14400 | > th | dose independent | sin | 3 | NA |
| 399 | 280.68 | temperature | 20 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 437 | 280.94 | temperature | 15 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 464 | 281.09 | temperature | 15 | 14400 | < th | dose independent | rect. | 15 | 15 |
| 474 | 281.12 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 486 | 281.18 | temperature | 20 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 488 | 281.19 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 11 |
| 512 | 281.30 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 514 | 281.32 | temperature | 15 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 525 | 281.40 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 573 | 281.65 | temperature | 15 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 617 | 281.89 | humidity | 60 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 620 | 281.92 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 621 | 281.94 | temperature | 15 | 14400 | < th | dose independent | sin | 10 | NA |
| 640 | 282.03 | temperature | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 661 | 282.10 | temperature | 20 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 667 | 282.13 | temperature | 15 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 702 | 282.29 | temperature | 15 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 716 | 282.36 | temperature | 20 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 755 | 282.55 | temperature | 20 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 758 | 282.58 | temperature | 15 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 794 | 282.76 | temperature | 15 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 814 | 282.84 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 900 | 283.39 | temperature | 15 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 973 | 283.77 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 988 | 283.82 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 13 |