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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0187600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Heat shock protein 70.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.79 (0.0435) R2 : 3.45e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0115 (0.0916) R2dN8 : 4.45e-05 R2N8 : 3.45e-05
σ : 0.819
deviance : 308.11
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
276.06 0.781 2.8 0.072 0.143 3.19 0.459 -10.4 -0.0149 2.88 0.983 11 24 3
286.49 0.788 2.79 0.058 0.158 3.65 0.032 -- -0.0123 4.39 0.8665 12 0.468 2.99
276.31 0.78 2.79 0.0679 0.166 3.51 -- -9.17 -0.00902 4.42 0.8576 10 0.0953 3.03
286.49 0.788 2.79 0.0615 0.158 3.62 -- -- -0.0131 4.55 0.8682 12 0.483 2.99
277.74 0.78 2.8 0.073 -- 3.59 -- -9.21 -0.00659 -- 0.8633 9 0.0711 3.06
305.18 0.819 2.79 0.0663 0.223 -- 0.0921 -- -0.00867 3.73 -- -- -- --
305.2 0.818 2.79 0.065 0.224 -- -- -- -0.00923 3.87 -- -- -- --
287.76 0.79 2.79 0.0674 -- 3.69 -- -- -0.0143 -- 0.89 12 0.306 2.88
286.59 0.788 2.79 -- 0.159 3.62 -- -- -0.02 4.54 0.8679 12 0.495 2.99
307.96 0.82 2.79 0.0742 -- -- -- -- -0.00325 -- -- -- -- --
305.31 0.817 2.79 -- 0.225 -- -- -- -0.0165 3.87 -- -- -- --
287.88 0.79 2.8 -- -- 3.7 -- -- -0.0216 -- 0.89 12 0.303 2.93
308.11 0.819 2.79 -- -- -- -- -- -0.0115 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 276.52 wind 1.0 10 < th dose dependent rect. 24 3
3 276.77 wind 7.0 1440 > th dose dependent rect. 1 2
4 276.78 wind 7.0 1440 > th dose independent rect. 1 2
18 278.13 wind 1.0 10 < th dose dependent rect. 11 16
57 280.05 wind 1.0 10 < th dose independent rect. 24 2
61 281.19 wind 1.0 10 < th dose independent rect. 11 15
70 282.15 wind 1.0 10 < th dose independent rect. 15 11
71 282.16 wind 1.0 10 < th dose independent rect. 17 9
78 282.31 temperature 30.0 90 > th dose dependent rect. 10 1
97 286.64 wind 7.0 30 > th dose dependent rect. 19 1
100 287.29 wind 7.0 30 > th dose independent rect. 19 1
103 288.06 temperature 30.0 90 > th dose independent rect. 10 1
116 288.82 wind 1.0 10 < th dose dependent sin 17 NA
128 288.99 wind 1.0 10 < th dose independent rect. 8 18
131 289.19 wind 1.0 10 < th dose independent rect. 6 20
134 289.49 precipitation 0.1 10 > th dose independent rect. 19 1
144 289.49 precipitation 0.1 10 > th dose dependent rect. 19 1
155 289.57 precipitation 0.1 10 > th dose independent rect. 7 13
159 289.57 precipitation 0.1 10 > th dose dependent rect. 7 13
189 290.47 precipitation 0.1 10 > th dose independent rect. 4 16
193 290.57 wind 1.0 90 < th dose independent rect. 6 20
228 291.39 temperature 20.0 90 < th dose dependent rect. 1 1
276 291.56 temperature 20.0 10 < th dose dependent rect. 2 1
279 291.69 temperature 25.0 30 > th dose dependent rect. 7 1
281 291.71 temperature 20.0 90 < th dose independent rect. 24 1
287 291.89 temperature 30.0 270 > th dose dependent rect. 8 3
305 292.04 temperature 30.0 270 > th dose independent rect. 8 3
321 292.14 wind 1.0 270 < th dose dependent rect. 22 1
323 292.29 wind 5.0 10 < th dose dependent rect. 11 21
329 292.43 wind 3.0 10 < th dose dependent rect. 11 3
345 292.63 wind 1.0 10 < th dose independent sin 18 NA
382 293.41 humidity 60.0 10 < th dose independent rect. 14 1
386 293.45 wind 1.0 10 < th dose dependent rect. 24 9
423 293.67 wind 1.0 90 < th dose independent rect. 6 1
435 293.84 wind 5.0 10 < th dose dependent rect. 1 23
439 293.92 temperature 25.0 90 > th dose independent rect. 6 2
446 294.07 temperature 25.0 10 > th dose independent rect. 7 1
472 294.14 wind 1.0 270 < th dose dependent rect. 21 5
490 294.19 wind 5.0 10 < th dose dependent rect. 13 23
517 294.28 wind 1.0 270 < th dose dependent rect. 6 20
519 294.32 wind 1.0 270 < th dose dependent rect. 16 10
537 294.35 wind 5.0 10 < th dose dependent rect. 17 23
541 294.45 wind 5.0 10 < th dose dependent no NA NA
542 294.47 wind 1.0 270 < th dose independent rect. 22 1
546 294.55 wind 3.0 10 < th dose independent rect. 11 4
563 294.56 wind 7.0 720 > th dose dependent rect. 19 1
565 294.58 temperature 30.0 1440 > th dose dependent rect. 18 15
569 294.59 wind 5.0 10 < th dose dependent rect. 19 23
571 294.65 wind 5.0 10 < th dose dependent rect. 23 23
592 294.71 wind 5.0 10 < th dose dependent rect. 20 19
604 294.80 wind 1.0 10 > th dose independent rect. 7 23
621 294.91 wind 1.0 270 < th dose dependent rect. 11 15
622 294.92 wind 1.0 10 < th dose dependent rect. 24 13
652 295.00 temperature 30.0 90 > th dose dependent sin 8 NA
656 295.03 wind 5.0 1440 < th dose independent rect. 4 1
687 295.19 wind 3.0 10 < th dose independent rect. 11 21
689 295.19 temperature 25.0 10 > th dose dependent rect. 20 12
691 295.20 wind 1.0 10 < th dose dependent rect. 24 18
695 295.21 wind 1.0 10 < th dose independent rect. 24 9
696 295.21 wind 1.0 10 < th dose dependent rect. 24 16
764 295.40 wind 5.0 720 > th dose independent rect. 19 1
775 295.45 wind 3.0 10 < th dose dependent rect. 11 8
790 295.50 wind 1.0 30 > th dose independent rect. 21 23
793 295.51 wind 5.0 10 < th dose dependent rect. 20 12
795 295.52 temperature 30.0 1440 > th dose dependent rect. 18 1
817 295.59 precipitation 0.1 10 > th dose independent sin 22 NA
834 295.64 precipitation 0.1 10 > th dose dependent sin 22 NA
839 295.66 wind 1.0 10 > th dose independent sin 18 NA
841 295.66 wind 5.0 1440 < th dose independent rect. 4 3
850 295.69 wind 5.0 1440 > th dose dependent rect. 6 1
898 295.85 wind 3.0 90 < th dose dependent rect. 17 22
901 295.86 temperature 25.0 720 > th dose independent rect. 20 1
923 295.91 wind 3.0 30 < th dose dependent sin 8 NA
924 295.91 wind 3.0 10 < th dose dependent rect. 17 16
957 295.98 wind 3.0 90 < th dose dependent rect. 19 19