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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0187500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Heat shock protein 70.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.99 (0.0242) R2 : 2.33e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00526 (0.051) R2dN8 : 3.01e-05 R2N8 : 2.33e-05
σ : 0.457
deviance : 95.68
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.38 0.444 2.98 -0.0887 0.275 0.447 -0.0465 0.588 0.0588 11.6 25.43 139 -- --
89.82 0.441 2.97 0.0067 0.272 0.399 -0.172 -- 0.0806 11.6 26 138 -- --
89.39 0.44 2.98 -0.09 0.278 0.45 -- 0.605 0.0596 11.6 25.5 132 -- --
89.95 0.442 2.97 -2.46e-05 0.275 0.406 -- -- 0.0821 11.7 26.17 132 -- --
91.97 0.447 2.98 -0.0281 -- 0.454 -- 0.275 0.0748 -- 27.19 750 -- --
92.11 0.45 2.99 -0.0923 0.225 -- -0.193 -- -0.00478 10.5 -- -- -- --
92.27 0.45 2.99 -0.1 0.226 -- -- -- -0.00531 10.5 -- -- -- --
92.04 0.447 2.97 0.0236 -- 0.445 -- -- 0.0899 -- 27.7 760 -- --
89.95 0.442 2.97 -- 0.276 0.402 -- -- 0.0814 11.7 26.21 132 -- --
95.39 0.456 3 -0.104 -- -- -- -- -0.00629 -- -- -- -- --
92.53 0.45 2.99 -- 0.226 -- -- -- 0.00584 10.6 -- -- -- --
92.05 0.447 2.97 -- -- 0.436 -- -- 0.086 -- 27.7 758 -- --
95.68 0.457 2.99 -- -- -- -- -- 0.00526 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.39 radiation 40 90 > th dose dependent rect. 12 1
2 86.00 atmosphere 1000 10 < th dose independent rect. 13 1
9 86.83 temperature 20 10 < th dose dependent rect. 6 1
24 87.22 temperature 15 10 > th dose dependent rect. 14 22
36 87.44 radiation 40 90 > th dose independent rect. 12 1
39 87.52 temperature 30 10 > th dose independent rect. 12 3
61 87.64 temperature 20 90 < th dose independent rect. 3 3
69 87.89 humidity 80 90 < th dose dependent rect. 12 1
72 87.90 temperature 20 10 < th dose independent rect. 4 2
88 88.01 wind 3 10 > th dose independent rect. 12 2
90 88.01 temperature 25 90 > th dose dependent rect. 12 1
91 88.04 wind 1 90 > th dose independent rect. 2 12
92 88.04 wind 1 10 > th dose dependent rect. 12 2
95 88.07 temperature 20 10 < th dose independent rect. 3 18
99 88.09 radiation 40 30 > th dose independent rect. 12 3
119 88.09 temperature 25 10 > th dose dependent rect. 12 2
143 88.28 humidity 60 90 < th dose independent rect. 12 2
144 88.28 temperature 20 90 > th dose independent rect. 3 8
151 88.34 temperature 20 270 > th dose independent rect. 3 6
154 88.35 radiation 40 30 < th dose independent sin 14 NA
158 88.38 temperature 20 270 < th dose independent rect. 2 1
162 88.39 humidity 60 10 < th dose dependent rect. 14 1
165 88.39 humidity 90 10 < th dose dependent rect. 12 2
166 88.43 radiation 40 30 > th dose independent sin 14 NA
172 88.46 temperature 25 10 > th dose independent rect. 14 22
174 88.47 temperature 20 90 > th dose independent rect. 1 10
181 88.49 temperature 20 10 < th dose dependent rect. 4 17
195 88.53 temperature 25 90 < th dose dependent rect. 2 18
196 88.54 humidity 90 10 < th dose independent rect. 12 2
200 88.54 temperature 20 270 > th dose dependent rect. 1 8
234 88.62 humidity 90 30 < th dose independent rect. 5 2
252 88.67 temperature 20 10 > th dose independent rect. 4 8
253 88.67 radiation 1 10 > th dose dependent rect. 12 2
258 88.69 temperature 20 90 < th dose independent rect. 2 12
262 88.71 temperature 20 90 < th dose independent rect. 2 9
265 88.71 temperature 20 10 < th dose independent rect. 3 11
278 88.73 radiation 1 10 < th dose dependent rect. 5 9
281 88.74 wind 1 90 > th dose independent rect. 19 11
304 88.77 humidity 90 90 > th dose dependent rect. 2 1
310 88.79 radiation 20 10 > th dose independent rect. 12 2
316 88.80 radiation 20 90 > th dose independent rect. 12 1
318 88.80 temperature 25 270 < th dose dependent rect. 2 1
320 88.80 temperature 20 90 > th dose dependent rect. 3 8
324 88.81 temperature 10 270 > th dose dependent rect. 21 12
337 88.82 temperature 10 720 > th dose dependent rect. 21 5
350 88.84 radiation 40 90 > th dose dependent sin 14 NA
368 88.86 temperature 30 90 < th dose dependent rect. 17 13
409 88.87 temperature 25 90 < th dose dependent rect. 23 22
424 88.89 atmosphere 1015 90 < th dose dependent rect. 12 1
461 88.92 temperature 30 720 < th dose dependent rect. 19 1
462 88.92 humidity 90 10 < th dose dependent rect. 6 1
465 88.93 atmosphere 1000 90 > th dose independent rect. 12 1
474 88.93 temperature 25 90 < th dose dependent rect. 8 22
490 88.95 wind 7 90 < th dose independent rect. 13 23
538 88.99 temperature 25 10 < th dose dependent rect. 24 21
540 89.00 temperature 30 10 > th dose independent rect. 14 1
549 89.01 temperature 20 90 > th dose independent sin 4 NA
556 89.02 wind 3 30 > th dose dependent rect. 6 1
557 89.02 temperature 25 30 > th dose dependent rect. 6 1
558 89.02 temperature 15 10 > th dose dependent rect. 4 8
563 89.03 radiation 1 90 < th dose independent rect. 9 2
570 89.03 radiation 1 90 < th dose dependent rect. 9 2
573 89.03 temperature 30 30 < th dose dependent rect. 19 12
577 89.04 atmosphere 1010 30 < th dose independent rect. 6 1
592 89.05 temperature 20 10 > th dose independent rect. 1 11
606 89.06 temperature 25 90 < th dose dependent rect. 2 4
697 89.12 temperature 20 10 > th dose independent sin 3 NA
698 89.12 wind 7 90 < th dose independent rect. 12 1
699 89.12 radiation 10 30 < th dose independent rect. 6 1
737 89.15 temperature 20 10 < th dose independent rect. 19 1
740 89.15 radiation 1 4320 > th dose independent rect. 9 1
793 89.19 wind 1 90 > th dose independent rect. 11 19
798 89.19 temperature 25 30 < th dose dependent rect. 17 19
828 89.22 wind 7 10 < th dose independent rect. 12 2
833 89.22 temperature 20 10 > th dose dependent sin 9 NA
850 89.23 temperature 25 1440 < th dose dependent rect. 16 1
879 89.26 radiation 1 10 < th dose dependent rect. 5 7
881 89.26 temperature 20 10 > th dose dependent rect. 1 11
884 89.26 radiation 1 30 < th dose dependent rect. 4 22
886 89.27 temperature 20 10 < th dose independent sin 2 NA
890 89.27 wind 1 10 > th dose independent rect. 12 19
919 89.29 wind 1 10 > th dose dependent rect. 3 4
948 89.30 atmosphere 1015 10 < th dose dependent rect. 12 2
957 89.31 wind 3 30 > th dose independent rect. 6 1
972 89.32 radiation 1 10 < th dose dependent rect. 5 1