Os11g0186300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ankyrin-like protein.
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Os11g0186300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ankyrin-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.91 | 0.458 | 2.92 | -0.485 | 0.104 | 27.8 | -0.196 | -100 | 0.0293 | 11.6 | 1.562 | 62 | -- | -- |
| 390.5 | 0.92 | 2.52 | 0.572 | 0.631 | 18.6 | 0.299 | -- | 1.02 | 8.39 | 1.507 | 74 | -- | -- |
| 95.07 | 0.454 | 2.92 | -0.491 | 0.105 | 27.7 | -- | -99.7 | 0.0285 | 11.8 | 1.593 | 92 | -- | -- |
| 99.76 | 0.465 | 2.85 | -0.208 | 0.114 | 5.33 | -- | -- | 0.0305 | 11.4 | 1.783 | 96 | -- | -- |
| 95.76 | 0.456 | 2.92 | -0.497 | -- | 27.9 | -- | -101 | 0.0272 | -- | 1.569 | 86 | -- | -- |
| 131.52 | 0.538 | 2.85 | -0.143 | 0.113 | -- | -0.145 | -- | 0.0182 | 13.1 | -- | -- | -- | -- |
| 131.58 | 0.537 | 2.85 | -0.148 | 0.117 | -- | -- | -- | 0.0179 | 13.9 | -- | -- | -- | -- |
| 100.57 | 0.467 | 2.85 | -0.211 | -- | 5.3 | -- | -- | 0.0292 | -- | 1.799 | 93 | -- | -- |
| 100.89 | 0.468 | 2.84 | -- | 0.116 | 5.27 | -- | -- | 0.0534 | 11.6 | 1.803 | 103 | -- | -- |
| 132.4 | 0.538 | 2.85 | -0.153 | -- | -- | -- | -- | 0.0152 | -- | -- | -- | -- | -- |
| 132.16 | 0.538 | 2.85 | -- | 0.119 | -- | -- | -- | 0.0344 | 13.9 | -- | -- | -- | -- |
| 101.74 | 0.47 | 2.85 | -- | -- | 5.25 | -- | -- | 0.0524 | -- | 1.817 | 102 | -- | -- |
| 133.02 | 0.538 | 2.85 | -- | -- | -- | -- | -- | 0.0322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.91 | precipitation | 1e-01 | 90 | > th | dose independent | rect. | 16 | 1 |
| 2 | 94.91 | precipitation | 1e-01 | 10 | > th | dose independent | rect. | 17 | 1 |
| 30 | 94.91 | precipitation | 1e-01 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 31 | 94.91 | precipitation | 1e-01 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 93 | 95.40 | atmosphere | 1e+03 | 90 | < th | dose independent | rect. | 16 | 1 |
| 117 | 96.79 | atmosphere | 1e+03 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 287 | 99.37 | precipitation | 1e-01 | 90 | > th | dose dependent | sin | 21 | NA |
| 292 | 99.60 | precipitation | 1e-01 | 10 | > th | dose independent | sin | 20 | NA |
| 293 | 99.60 | precipitation | 1e-01 | 10 | > th | dose dependent | sin | 20 | NA |
| 294 | 99.61 | precipitation | 1e-01 | 10 | < th | dose independent | sin | 20 | NA |
| 295 | 99.61 | precipitation | 1e-01 | 10 | < th | dose dependent | sin | 20 | NA |
| 512 | 105.82 | precipitation | 1e-01 | 90 | > th | dose dependent | rect. | 16 | 19 |
| 579 | 106.85 | precipitation | 1e-01 | 90 | > th | dose dependent | no | NA | NA |
| 589 | 107.03 | precipitation | 1e-01 | 90 | < th | dose independent | sin | 21 | NA |
| 590 | 107.03 | precipitation | 1e-01 | 90 | < th | dose dependent | sin | 21 | NA |
| 593 | 107.14 | precipitation | 1e-01 | 90 | > th | dose independent | sin | 21 | NA |
| 658 | 111.06 | atmosphere | 1e+03 | 270 | < th | dose independent | rect. | 14 | 3 |
| 711 | 112.27 | atmosphere | 1e+03 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 941 | 117.08 | precipitation | 1e-01 | 90 | > th | dose independent | rect. | 16 | 19 |
| 999 | 117.79 | precipitation | 1e-01 | 90 | > th | dose independent | no | NA | NA |
| 1000 | 117.79 | precipitation | 1e-01 | 90 | < th | dose independent | no | NA | NA |