FiT-DB / Search/ Help/ Sample detail

Os11g0186200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Aldehyde dehydrogenase (EC 1.2.1.3).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0304) R2 : 0.591
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.05 (0.0798) R2dC : 0.594 R2C : 0.591
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0123 (0.064) R2dN8 : 4.29e-05 R2N8 : -0.00279
σ : 0.574
deviance : 150.49
__
_____
C
peak time of C : 18.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.98 0.512 12 0.465 2.4 0.683 2.2 -1.05 0.0765 18.4 80 729 -- --
120.54 0.511 12 0.418 2.32 0.674 2.65 -- 0.108 18.5 80.11 801 -- --
128.42 0.528 12 0.534 2.48 0.745 -- -1.76 0.138 18.4 81 689 -- --
137.66 0.546 12 0.323 2.32 0.697 -- -- 0.0831 18.5 82.49 813 -- --
348.95 0.875 11.9 0.28 -- -0.377 -- -0.348 0.0108 -- 81 689 -- --
131.07 0.537 12 0.354 2.04 -- 2.61 -- 0.0388 18.2 -- -- -- --
147.64 0.569 12 0.329 2.05 -- -- -- 0.0489 18.1 -- -- -- --
242.44 0.725 11.9 0.162 -- -1.59 -- -- -0.0655 -- 72.02 457 -- --
139.89 0.551 12 -- 2.28 0.705 -- -- 0.0548 18.5 83.17 842 -- --
366.05 0.894 11.9 0.27 -- -- -- -- 0.00261 -- -- -- -- --
150.49 0.574 12 -- 2.05 -- -- -- 0.0123 18.1 -- -- -- --
243.14 0.726 12 -- -- -1.59 -- -- -0.0855 -- 72.16 457 -- --
367.97 0.895 11.9 -- -- -- -- -- -0.0273 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 108.44 humidity 50.0 90 > th dose dependent rect. 23 18
2 108.68 temperature 10.0 30 > th dose dependent rect. 18 18
3 109.34 humidity 50.0 10 > th dose dependent rect. 6 12
7 110.19 humidity 70.0 720 > th dose independent rect. 19 13
8 110.34 humidity 50.0 720 > th dose dependent rect. 19 5
12 110.53 temperature 25.0 30 > th dose independent rect. 18 7
19 110.88 temperature 25.0 720 > th dose independent rect. 18 1
21 111.08 atmosphere 1005.0 30 > th dose dependent rect. 18 5
25 111.20 radiation 1.0 720 > th dose independent rect. 8 11
35 111.25 humidity 70.0 720 > th dose independent rect. 19 7
36 111.27 temperature 10.0 30 > th dose dependent rect. 20 16
37 111.28 temperature 15.0 90 > th dose independent rect. 9 14
40 111.40 wind 1.0 90 > th dose independent rect. 23 9
43 111.47 temperature 15.0 720 > th dose dependent rect. 18 1
44 111.50 humidity 50.0 10 > th dose dependent rect. 12 6
49 111.69 humidity 50.0 90 > th dose dependent rect. 12 5
56 111.84 humidity 80.0 720 < th dose independent rect. 18 1
57 111.85 temperature 15.0 90 > th dose independent rect. 17 19
72 112.21 temperature 10.0 1440 > th dose independent rect. 19 11
75 112.21 temperature 30.0 1440 < th dose independent rect. 19 11
79 112.21 humidity 50.0 1440 > th dose independent rect. 19 11
81 112.21 atmosphere 995.0 1440 > th dose independent rect. 19 11
82 112.21 radiation 20.0 1440 < th dose independent rect. 19 11
91 112.21 temperature 10.0 1440 > th dose independent rect. 6 13
107 112.43 temperature 10.0 1440 > th dose independent rect. 13 6
111 112.43 temperature 10.0 1440 > th dose independent rect. 19 18
114 112.43 atmosphere 995.0 1440 > th dose independent rect. 19 18
126 112.45 radiation 20.0 10 < th dose dependent rect. 6 11
127 112.46 precipitation 0.1 720 < th dose independent rect. 7 22
129 112.46 precipitation 0.1 720 < th dose dependent rect. 7 22
130 112.49 radiation 1.0 270 < th dose dependent rect. 5 11
132 112.55 radiation 30.0 90 < th dose independent rect. 23 10
141 112.75 wind 5.0 90 < th dose independent rect. 9 14
143 112.79 precipitation 0.1 270 < th dose independent rect. 15 21
145 112.79 precipitation 0.1 270 < th dose dependent rect. 15 21
148 112.87 atmosphere 1000.0 30 > th dose independent rect. 12 6
149 112.88 humidity 50.0 270 > th dose dependent rect. 12 3
150 112.91 wind 9.0 30 < th dose independent rect. 12 6
154 112.99 precipitation 0.1 30 < th dose independent rect. 18 18
155 112.99 precipitation 0.1 30 < th dose dependent rect. 18 18
157 113.00 wind 9.0 30 < th dose independent rect. 18 18
161 113.07 wind 1.0 30 > th dose independent rect. 12 6
162 113.08 radiation 40.0 4320 < th dose dependent rect. 19 10
168 113.14 humidity 60.0 90 > th dose independent rect. 23 10
172 113.20 temperature 10.0 90 > th dose independent rect. 23 10
174 113.20 atmosphere 995.0 90 > th dose independent rect. 23 10
176 113.21 wind 9.0 90 < th dose independent rect. 23 10
177 113.21 temperature 15.0 270 > th dose independent rect. 7 14
178 113.21 radiation 40.0 270 < th dose dependent rect. 21 11
181 113.24 temperature 30.0 30 < th dose independent rect. 12 6
183 113.25 temperature 30.0 90 < th dose independent rect. 23 10
184 113.26 atmosphere 1015.0 90 < th dose independent rect. 9 14
186 113.26 precipitation 0.1 270 < th dose independent rect. 14 23
188 113.26 precipitation 0.1 270 < th dose dependent rect. 14 23
192 113.29 wind 1.0 30 > th dose independent rect. 12 21
198 113.35 temperature 10.0 30 > th dose independent rect. 12 6
201 113.35 atmosphere 1015.0 30 < th dose independent rect. 12 6
203 113.35 atmosphere 995.0 30 > th dose independent rect. 18 18
205 113.37 wind 1.0 270 > th dose independent rect. 12 3
206 113.37 precipitation 0.1 30 < th dose independent rect. 12 6
207 113.37 precipitation 0.1 30 < th dose dependent rect. 12 6
220 113.47 humidity 80.0 1440 < th dose independent rect. 7 6
221 113.50 humidity 60.0 30 > th dose independent rect. 12 6
224 113.52 atmosphere 995.0 30 > th dose dependent rect. 12 6
227 113.53 temperature 25.0 720 > th dose dependent rect. 18 5
231 113.56 humidity 90.0 90 < th dose independent rect. 8 15
237 113.64 humidity 50.0 270 > th dose independent rect. 15 21
241 113.66 radiation 1.0 270 < th dose independent rect. 5 11
246 113.69 wind 9.0 90 < th dose independent rect. 9 14
255 113.74 wind 9.0 30 < th dose dependent rect. 18 18
267 113.82 humidity 50.0 10 > th dose dependent rect. 1 17
268 113.83 wind 9.0 270 < th dose independent rect. 12 3
270 113.84 temperature 25.0 30 > th dose independent rect. 18 12
283 113.94 radiation 40.0 30 < th dose independent rect. 12 6
284 113.94 wind 1.0 30 > th dose independent rect. 1 8
286 113.96 temperature 15.0 90 > th dose independent rect. 20 16
287 113.98 atmosphere 1000.0 270 > th dose independent rect. 12 3
291 114.00 wind 9.0 270 < th dose independent rect. 15 21
300 114.06 atmosphere 1015.0 30 < th dose independent rect. 18 18
315 114.08 humidity 90.0 720 < th dose dependent rect. 18 1
328 114.12 precipitation 0.1 90 < th dose independent rect. 9 14
329 114.12 precipitation 0.1 90 < th dose dependent rect. 9 14
337 114.15 wind 1.0 30 > th dose independent rect. 1 17
341 114.16 humidity 50.0 270 > th dose independent rect. 12 3
344 114.19 wind 1.0 720 > th dose independent rect. 17 2
345 114.19 temperature 10.0 270 > th dose independent rect. 12 3
347 114.19 atmosphere 1015.0 270 < th dose independent rect. 12 3
358 114.22 humidity 80.0 720 > th dose dependent rect. 11 13
360 114.23 wind 5.0 90 < th dose independent rect. 8 22
367 114.25 humidity 90.0 10 < th dose independent rect. 9 16
369 114.26 wind 1.0 270 > th dose independent rect. 4 13
371 114.27 precipitation 0.1 270 < th dose independent rect. 12 3
373 114.27 precipitation 0.1 270 < th dose dependent rect. 12 3
376 114.29 wind 7.0 720 < th dose independent rect. 17 2
378 114.29 humidity 50.0 30 > th dose independent rect. 18 18
380 114.31 humidity 90.0 90 < th dose dependent rect. 20 16
382 114.32 atmosphere 995.0 270 > th dose dependent rect. 12 3
397 114.37 temperature 25.0 720 > th dose dependent rect. 22 1
399 114.38 precipitation 0.1 270 < th dose independent rect. 7 14
401 114.38 precipitation 0.1 270 < th dose dependent rect. 7 14
413 114.46 radiation 1.0 720 > th dose independent rect. 17 2
424 114.47 humidity 80.0 720 < th dose independent rect. 17 4
428 114.49 humidity 80.0 720 > th dose independent rect. 21 1
434 114.52 humidity 80.0 1440 > th dose independent rect. 7 7
439 114.55 radiation 20.0 270 < th dose independent rect. 21 11
446 114.57 humidity 80.0 90 > th dose independent rect. 23 18
448 114.59 humidity 90.0 720 < th dose dependent rect. 18 5
451 114.61 humidity 90.0 720 < th dose dependent rect. 18 3
458 114.65 temperature 25.0 30 > th dose dependent rect. 18 10
465 114.69 temperature 25.0 30 > th dose dependent rect. 18 8
470 114.71 humidity 70.0 10 > th dose independent rect. 18 12
475 114.72 radiation 40.0 720 < th dose independent rect. 19 14
488 114.76 temperature 15.0 30 > th dose dependent rect. 18 7
490 114.76 radiation 1.0 720 < th dose dependent rect. 8 16
499 114.81 humidity 80.0 720 > th dose independent rect. 4 18
515 114.85 radiation 1.0 720 < th dose dependent rect. 6 18
527 114.87 humidity 80.0 10 > th dose independent rect. 6 11
528 114.87 atmosphere 995.0 270 > th dose independent rect. 15 21
542 114.95 wind 1.0 270 > th dose independent rect. 13 1
552 114.96 precipitation 0.1 270 < th dose independent rect. 1 11
556 114.96 precipitation 0.1 270 < th dose dependent rect. 1 11
574 115.01 humidity 90.0 10 < th dose dependent rect. 9 3
580 115.03 precipitation 0.1 90 < th dose independent rect. 23 10
581 115.03 precipitation 0.1 90 < th dose dependent rect. 23 10
611 115.12 humidity 80.0 720 < th dose independent rect. 9 12
616 115.13 radiation 40.0 90 < th dose dependent rect. 23 10
620 115.14 temperature 25.0 720 > th dose dependent rect. 20 3
623 115.14 temperature 10.0 90 > th dose dependent rect. 3 10
625 115.15 wind 1.0 90 > th dose independent rect. 9 14
627 115.16 temperature 15.0 720 > th dose independent rect. 17 2
641 115.17 precipitation 0.1 720 < th dose independent rect. 17 2
645 115.17 atmosphere 1005.0 270 > th dose dependent rect. 18 1
646 115.17 precipitation 0.1 720 < th dose dependent rect. 17 2
655 115.19 humidity 80.0 720 > th dose dependent rect. 15 9
659 115.20 humidity 50.0 90 > th dose dependent rect. 23 10
664 115.21 humidity 80.0 90 > th dose dependent rect. 5 22
681 115.25 humidity 70.0 270 > th dose independent rect. 21 11
735 115.34 humidity 90.0 30 < th dose dependent rect. 20 18
741 115.36 temperature 10.0 270 > th dose independent rect. 21 10
742 115.36 temperature 30.0 270 < th dose independent rect. 21 10
743 115.36 humidity 50.0 270 > th dose independent rect. 21 10
745 115.36 atmosphere 995.0 270 > th dose independent rect. 21 10
755 115.37 humidity 90.0 90 < th dose independent rect. 17 19
764 115.39 temperature 10.0 30 > th dose dependent rect. 12 6
767 115.40 wind 9.0 270 < th dose independent rect. 21 10
768 115.40 humidity 70.0 720 < th dose independent rect. 19 13
779 115.42 humidity 60.0 90 > th dose independent rect. 23 18
812 115.50 humidity 70.0 720 > th dose dependent rect. 4 20
814 115.51 radiation 1.0 720 < th dose independent rect. 8 16
830 115.53 humidity 80.0 30 < th dose independent rect. 9 3
847 115.56 temperature 10.0 270 > th dose dependent rect. 12 3
856 115.58 temperature 10.0 90 > th dose dependent rect. 8 15
886 115.64 humidity 60.0 30 > th dose independent rect. 1 17
890 115.65 wind 1.0 90 > th dose dependent rect. 12 5
918 115.68 humidity 80.0 1440 < th dose dependent rect. 8 4
940 115.72 temperature 10.0 10 > th dose dependent rect. 9 14
943 115.73 wind 1.0 10 > th dose dependent rect. 1 7
944 115.73 wind 9.0 90 < th dose dependent rect. 9 14
971 115.78 humidity 80.0 1440 < th dose dependent rect. 11 1
983 115.80 wind 1.0 270 > th dose dependent rect. 12 3
996 115.84 precipitation 0.1 720 < th dose independent rect. 17 12
997 115.84 precipitation 0.1 720 < th dose dependent rect. 17 12
999 115.86 radiation 20.0 720 < th dose independent rect. 5 2