Os11g0185800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0185800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.35 | 0.547 | 5.73 | 1.14 | 1.6 | 0.193 | 1.25 | 5.95 | 0.156 | 17.9 | 6.045 | 5441 | -- | -- |
| 164.56 | 0.602 | 5.95 | -0.157 | 1.65 | -0.322 | 1.12 | -- | -0.184 | 17.8 | 12.8 | 15363 | -- | -- |
| 138.67 | 0.548 | 5.72 | 1.15 | 1.61 | 0.209 | -- | 5.93 | 0.17 | 17.8 | 8.026 | 6309 | -- | -- |
| 167.01 | 0.606 | 5.95 | -0.268 | 1.53 | 0.326 | -- | -- | -0.23 | 18.1 | 26.64 | 22174 | -- | -- |
| 270.93 | 0.767 | 5.7 | 1.05 | -- | 0.222 | -- | 5.82 | 0.105 | -- | 10.71 | 4914 | -- | -- |
| 165.55 | 0.603 | 5.96 | -0.217 | 1.59 | -- | 1.11 | -- | -0.229 | 18 | -- | -- | -- | -- |
| 168.52 | 0.608 | 5.95 | -0.226 | 1.6 | -- | -- | -- | -0.224 | 17.9 | -- | -- | -- | -- |
| 274.73 | 0.775 | 5.93 | -0.408 | -- | 1.15 | -- | -- | -0.274 | -- | 26.64 | 22174 | -- | -- |
| 166.19 | 0.6 | 5.97 | -- | 1.65 | 0.235 | -- | -- | -0.294 | 17.9 | 30.7 | 23407 | -- | -- |
| 300.73 | 0.81 | 5.93 | -0.274 | -- | -- | -- | -- | -0.261 | -- | -- | -- | -- | -- |
| 169.86 | 0.61 | 5.95 | -- | 1.6 | -- | -- | -- | -0.199 | 17.9 | -- | -- | -- | -- |
| 279.05 | 0.781 | 5.92 | -- | -- | 1.09 | -- | -- | -0.229 | -- | 26.64 | 22174 | -- | -- |
| 302.71 | 0.812 | 5.92 | -- | -- | -- | -- | -- | -0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.50 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 3 | 125.46 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 5 | 125.77 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 18 | 128.97 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 19 | 128.97 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 21 | 129.27 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 22 | 129.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 31 | 129.73 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 32 | 129.73 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 44 | 130.91 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 20 | 10 |
| 53 | 131.47 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 22 | 8 |
| 57 | 132.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 68 | 132.61 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 70 | 132.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 82 | 133.35 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 83 | 133.35 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 84 | 133.40 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 94 | 133.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 99 | 133.80 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 102 | 133.84 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 106 | 133.94 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 107 | 133.96 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 108 | 133.98 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 112 | 134.03 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 114 | 134.04 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 134 | 134.32 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 141 | 134.41 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 145 | 134.44 | wind | 5.0 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 150 | 134.46 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 156 | 134.52 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 170 | 134.62 | temperature | 30.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 183 | 134.67 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 196 | 134.74 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 222 | 134.83 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 231 | 134.85 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 243 | 134.88 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 290 | 134.98 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 291 | 134.98 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 293 | 134.98 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 324 | 135.02 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 352 | 135.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 355 | 135.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 373 | 135.08 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 413 | 135.13 | temperature | 15.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 473 | 135.20 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 485 | 135.21 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 23 | 13 |
| 515 | 135.24 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 523 | 135.25 | wind | 5.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 570 | 135.30 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 588 | 135.31 | wind | 5.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 594 | 135.31 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 632 | 135.34 | temperature | 20.0 | 43200 | < th | dose dependent | no | NA | NA |
| 652 | 135.37 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 5 |
| 661 | 135.37 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 719 | 135.49 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 753 | 135.55 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 764 | 135.57 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 783 | 135.60 | temperature | 20.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 794 | 135.61 | humidity | 90.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 819 | 135.64 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 822 | 135.65 | temperature | 20.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 840 | 135.67 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 861 | 135.70 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 904 | 135.74 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 944 | 135.78 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 4 |