FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0185100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.84 (0.0216) R2 : 0.00686
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0807 (0.0455) R2dN8 : 0.00885 R2N8 : 0.00686
σ : 0.407
deviance : 75.91
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73 0.401 2.83 -0.0539 0.351 0.351 -1.06 -1.08 0.109 14.3 22.09 315 -- --
73.96 0.401 2.84 -0.0969 0.251 0.321 -0.182 -- 0.0969 14.5 49.57 390 -- --
73.91 0.4 2.83 -0.094 0.402 0.385 -- -0.0938 0.0952 14.3 19.14 345 -- --
73.87 0.4 2.84 -0.0931 0.362 0.357 -- -- 0.0982 14.1 20 345 -- --
74.86 0.403 2.85 -0.122 -- 0.115 -- -0.495 0.077 -- 50 1025 -- --
75.16 0.406 2.84 -0.121 0.0774 -- 0.119 -- 0.0672 9.03 -- -- -- --
75.18 0.406 2.84 -0.116 0.0784 -- -- -- 0.0679 10.2 -- -- -- --
75 0.403 2.84 -0.103 -- 0.128 -- -- 0.0845 -- 60 982 -- --
74.1 0.401 2.84 -- 0.353 0.356 -- -- 0.106 14.1 21.41 345 -- --
75.55 0.406 2.84 -0.117 -- -- -- -- 0.0677 -- -- -- -- --
75.53 0.407 2.84 -- 0.079 -- -- -- 0.0808 10.3 -- -- -- --
75.27 0.404 2.84 -- -- 0.136 -- -- 0.0971 -- 26.93 1026 -- --
75.91 0.407 2.84 -- -- -- -- -- 0.0807 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.04 radiation 10.0 720 < th dose dependent rect. 11 1
2 69.07 radiation 10.0 90 < th dose dependent rect. 10 2
3 69.53 precipitation 0.1 1440 > th dose independent rect. 10 3
4 69.53 precipitation 0.1 1440 > th dose dependent rect. 10 3
5 69.61 precipitation 0.1 1440 > th dose independent rect. 12 1
7 69.61 precipitation 0.1 1440 > th dose dependent rect. 12 1
9 69.92 wind 1.0 1440 > th dose independent rect. 17 1
10 69.96 wind 1.0 1440 < th dose independent rect. 17 1
11 70.07 wind 1.0 1440 < th dose dependent rect. 17 1
14 70.69 radiation 10.0 90 < th dose independent rect. 10 2
18 71.38 wind 9.0 10 > th dose dependent rect. 17 1
22 71.48 temperature 25.0 30 > th dose independent rect. 8 1
23 71.48 temperature 10.0 1440 > th dose independent rect. 9 1
26 71.48 humidity 80.0 30 < th dose independent rect. 8 1
27 71.48 atmosphere 995.0 1440 > th dose independent rect. 9 1
30 71.48 atmosphere 1015.0 1440 < th dose independent rect. 9 1
31 71.48 temperature 10.0 1440 > th dose independent rect. 10 23
34 71.49 temperature 20.0 30 > th dose dependent rect. 8 1
36 71.49 humidity 80.0 30 < th dose dependent rect. 8 1
38 71.49 atmosphere 1005.0 30 > th dose dependent rect. 8 1
39 71.50 wind 1.0 30 > th dose independent rect. 8 1
41 71.50 atmosphere 1005.0 30 > th dose independent rect. 8 1
42 71.50 radiation 10.0 30 > th dose independent rect. 8 1
43 71.50 radiation 30.0 30 < th dose independent rect. 8 1
44 71.50 temperature 15.0 30 > th dose independent rect. 9 23
45 71.50 temperature 10.0 30 > th dose dependent rect. 8 1
47 71.50 atmosphere 995.0 30 > th dose dependent rect. 8 1
49 71.51 wind 5.0 30 < th dose independent rect. 8 1
52 71.51 temperature 10.0 30 > th dose independent rect. 8 1
55 71.51 temperature 30.0 30 < th dose independent rect. 8 1
56 71.51 humidity 50.0 30 > th dose independent rect. 8 1
59 71.51 atmosphere 995.0 30 > th dose independent rect. 8 1
61 71.51 atmosphere 1010.0 30 < th dose independent rect. 8 1
65 71.51 precipitation 0.1 30 < th dose independent rect. 8 1
67 71.51 wind 1.0 30 > th dose dependent rect. 8 1
68 71.51 wind 9.0 30 < th dose dependent rect. 8 1
69 71.51 radiation 1.0 30 > th dose dependent rect. 8 1
71 71.51 precipitation 0.1 30 < th dose dependent rect. 8 1
76 71.52 radiation 40.0 30 < th dose dependent rect. 8 1
80 71.53 humidity 50.0 30 > th dose dependent rect. 8 1
88 71.56 atmosphere 1015.0 30 < th dose dependent rect. 8 1
89 71.57 wind 9.0 30 < th dose independent rect. 9 23
102 71.62 temperature 30.0 30 < th dose dependent rect. 8 1
144 71.96 humidity 50.0 1440 > th dose independent rect. 9 1
145 71.98 precipitation 0.1 30 < th dose independent rect. 9 23
146 71.98 precipitation 0.1 30 < th dose dependent rect. 9 23
148 72.04 atmosphere 995.0 30 > th dose independent rect. 9 23
164 72.43 radiation 20.0 90 < th dose independent rect. 7 5
168 72.50 radiation 1.0 720 < th dose independent rect. 10 1
171 72.52 radiation 20.0 720 > th dose independent rect. 9 2
172 72.54 radiation 20.0 90 < th dose independent rect. 7 7
173 72.55 radiation 1.0 720 > th dose independent rect. 9 7
177 72.58 radiation 1.0 720 < th dose independent rect. 10 5
178 72.58 radiation 1.0 720 < th dose dependent rect. 10 5
181 72.60 radiation 1.0 720 < th dose independent rect. 13 2
183 72.60 radiation 1.0 720 < th dose dependent rect. 13 2
186 72.62 radiation 20.0 10 < th dose independent rect. 8 4
191 72.64 radiation 10.0 4320 < th dose independent rect. 11 1
192 72.64 humidity 90.0 720 > th dose independent rect. 11 2
198 72.66 humidity 90.0 720 > th dose dependent rect. 11 2
209 72.71 radiation 10.0 270 < th dose independent rect. 7 10
210 72.71 radiation 10.0 270 < th dose independent rect. 4 23
215 72.75 temperature 20.0 720 < th dose independent rect. 9 1
229 72.80 humidity 50.0 30 > th dose independent rect. 9 23
236 72.82 radiation 30.0 720 < th dose independent rect. 11 1
246 72.84 radiation 10.0 270 < th dose independent rect. 5 12
247 72.84 radiation 10.0 270 < th dose independent rect. 14 22
253 72.86 radiation 1.0 270 < th dose independent rect. 13 5
257 72.86 radiation 20.0 270 < th dose dependent rect. 4 23
259 72.87 radiation 10.0 270 < th dose independent rect. 8 1
266 72.88 wind 9.0 14400 > th dose independent rect. 1 1
270 72.88 wind 9.0 14400 > th dose dependent rect. 1 1
289 72.93 humidity 80.0 270 > th dose independent rect. 13 8
295 72.94 radiation 20.0 90 < th dose independent rect. 7 16
303 72.96 radiation 1.0 720 > th dose independent rect. 9 20
306 72.97 radiation 20.0 720 > th dose independent rect. 9 5
312 72.98 radiation 10.0 270 < th dose independent rect. 5 7
336 73.00 wind 3.0 270 < th dose dependent rect. 8 1
346 73.03 wind 3.0 10 < th dose independent rect. 12 1
351 73.03 radiation 20.0 270 > th dose independent rect. 13 22
357 73.04 humidity 70.0 720 > th dose independent rect. 21 17
377 73.06 radiation 10.0 720 > th dose dependent rect. 9 1
380 73.07 humidity 80.0 270 > th dose independent rect. 17 1
392 73.08 radiation 10.0 270 < th dose independent rect. 7 23
395 73.08 radiation 20.0 270 < th dose dependent rect. 13 23
396 73.09 radiation 10.0 270 < th dose independent sin 23 NA
418 73.11 humidity 70.0 720 < th dose independent rect. 10 1
421 73.11 radiation 20.0 270 < th dose dependent sin 22 NA
439 73.13 humidity 70.0 720 > th dose independent rect. 10 3
443 73.13 radiation 40.0 720 < th dose independent rect. 21 16
445 73.13 radiation 10.0 270 < th dose independent rect. 18 23
449 73.13 temperature 25.0 90 > th dose dependent rect. 1 8
450 73.13 radiation 10.0 270 > th dose dependent rect. 14 21
461 73.14 temperature 25.0 90 > th dose dependent rect. 21 12
464 73.15 radiation 10.0 4320 < th dose independent rect. 14 2
471 73.15 radiation 40.0 90 < th dose dependent rect. 7 7
480 73.16 radiation 1.0 1440 < th dose dependent rect. 24 5
482 73.16 radiation 20.0 270 < th dose dependent rect. 7 10
488 73.17 radiation 1.0 720 < th dose independent rect. 11 12
491 73.17 radiation 10.0 270 < th dose independent rect. 10 23
504 73.18 radiation 40.0 90 < th dose independent rect. 7 16
506 73.18 wind 1.0 30 > th dose independent rect. 9 23
516 73.19 temperature 20.0 270 < th dose independent rect. 9 5
531 73.20 radiation 1.0 720 > th dose independent rect. 13 4
536 73.20 humidity 80.0 10 > th dose independent rect. 13 10
554 73.20 radiation 30.0 90 < th dose dependent rect. 7 5
555 73.20 radiation 20.0 270 < th dose dependent rect. 5 12
556 73.21 radiation 20.0 720 > th dose independent sin 3 NA
557 73.21 radiation 10.0 270 < th dose independent no NA NA
586 73.21 radiation 40.0 720 < th dose dependent rect. 7 16
592 73.22 radiation 1.0 720 > th dose independent rect. 14 2
613 73.22 humidity 60.0 720 > th dose dependent rect. 11 2
615 73.22 radiation 1.0 720 > th dose dependent rect. 9 7
616 73.22 humidity 70.0 270 > th dose dependent rect. 13 8
620 73.23 radiation 10.0 4320 < th dose independent rect. 11 5
648 73.23 radiation 1.0 1440 < th dose dependent rect. 19 10
649 73.23 radiation 40.0 720 < th dose dependent rect. 21 21
652 73.23 radiation 20.0 270 < th dose dependent rect. 7 23
701 73.25 humidity 70.0 720 > th dose independent rect. 24 14
708 73.25 radiation 1.0 720 > th dose independent rect. 13 16
716 73.25 radiation 40.0 720 > th dose independent rect. 14 21
722 73.25 atmosphere 1015.0 30 < th dose independent rect. 9 23
746 73.26 humidity 70.0 720 > th dose independent rect. 7 8
749 73.26 humidity 70.0 720 > th dose independent rect. 7 10
758 73.26 radiation 1.0 1440 < th dose dependent rect. 21 8
759 73.26 radiation 1.0 720 < th dose dependent rect. 11 12
761 73.27 radiation 1.0 720 > th dose independent sin 18 NA
762 73.27 radiation 10.0 720 > th dose independent sin 23 NA
763 73.27 temperature 25.0 720 < th dose independent rect. 11 3
771 73.27 radiation 1.0 720 > th dose independent rect. 12 7
790 73.27 radiation 40.0 720 < th dose independent rect. 16 22
800 73.27 radiation 40.0 720 < th dose dependent rect. 7 11
813 73.27 radiation 20.0 270 < th dose dependent rect. 10 23
814 73.28 humidity 70.0 720 > th dose independent sin 5 NA
838 73.28 radiation 1.0 720 < th dose independent rect. 11 16
855 73.28 radiation 40.0 720 < th dose dependent rect. 21 17
916 73.29 radiation 10.0 720 > th dose dependent rect. 9 4
926 73.29 radiation 20.0 270 < th dose dependent rect. 7 13
927 73.29 radiation 40.0 90 < th dose dependent rect. 7 16
934 73.30 humidity 80.0 30 > th dose independent rect. 17 6
965 73.30 wind 1.0 4320 < th dose dependent rect. 22 1
973 73.30 radiation 1.0 720 < th dose dependent rect. 11 17
985 73.31 humidity 70.0 720 < th dose independent rect. 9 7