Os11g0184200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 1 protein.
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Os11g0184200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.48 | 0.442 | 2.83 | 0.008 | 0.0955 | 0.347 | -0.145 | -0.153 | 0.0678 | 11 | 1010 | 1411 | -- | -- |
| 88.54 | 0.438 | 2.83 | -0.0113 | 0.0961 | 0.361 | -0.145 | -- | 0.0644 | 11.1 | 1010 | 1410 | -- | -- |
| 88.56 | 0.438 | 2.83 | 0.00324 | 0.0972 | 0.351 | -- | -0.155 | 0.0678 | 10.5 | 1010 | 1410 | -- | -- |
| 88.63 | 0.438 | 2.83 | -0.0166 | 0.0976 | 0.37 | -- | -- | 0.0631 | 10.5 | 1010 | 1421 | -- | -- |
| 89.14 | 0.44 | 2.83 | -0.000696 | -- | 0.352 | -- | -0.156 | 0.0686 | -- | 1010 | 1410 | -- | -- |
| 91.58 | 0.449 | 2.84 | -0.0823 | 0.0994 | -- | -0.204 | -- | 0.0211 | 11.9 | -- | -- | -- | -- |
| 91.74 | 0.449 | 2.84 | -0.091 | 0.102 | -- | -- | -- | 0.0198 | 11.2 | -- | -- | -- | -- |
| 89.19 | 0.44 | 2.84 | -0.0132 | -- | 0.391 | -- | -- | 0.0664 | -- | 1011 | 1569 | -- | -- |
| 88.58 | 0.438 | 2.83 | -- | 0.101 | 0.394 | -- | -- | 0.0676 | 10.5 | 1011 | 1526 | -- | -- |
| 92.39 | 0.449 | 2.85 | -0.0935 | -- | -- | -- | -- | 0.0189 | -- | -- | -- | -- | -- |
| 91.96 | 0.449 | 2.84 | -- | 0.103 | -- | -- | -- | 0.0299 | 11.3 | -- | -- | -- | -- |
| 89.2 | 0.44 | 2.83 | -- | -- | 0.394 | -- | -- | 0.0682 | -- | 1011 | 1577 | -- | -- |
| 92.62 | 0.449 | 2.84 | -- | -- | -- | -- | -- | 0.0292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.39 | wind | 9.0 | 90 | > th | dose independent | rect. | 13 | 2 |
| 2 | 78.39 | wind | 9.0 | 90 | > th | dose dependent | rect. | 13 | 2 |
| 5 | 78.41 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 17 | 78.41 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 35 | 79.60 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 38 | 79.98 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 41 | 80.08 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 45 | 80.11 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 51 | 80.23 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 66 | 80.23 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 87 | 80.54 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 106 | 80.98 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 136 | 82.68 | radiation | 30.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 138 | 82.97 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 154 | 84.01 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 163 | 84.29 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 187 | 84.40 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 199 | 84.74 | humidity | 60.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 216 | 85.44 | temperature | 25.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 218 | 85.49 | humidity | 60.0 | 10 | > th | dose independent | rect. | 13 | 16 |
| 221 | 85.57 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 226 | 85.66 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 230 | 85.72 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 13 | 16 |
| 234 | 85.76 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 3 |
| 237 | 85.80 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 16 |
| 239 | 85.80 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 16 |
| 249 | 85.93 | temperature | 30.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 269 | 86.00 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 16 |
| 272 | 86.05 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 8 |
| 275 | 86.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 278 | 86.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 279 | 86.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 16 |
| 284 | 86.11 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 13 | 16 |
| 287 | 86.14 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 8 |
| 290 | 86.14 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 8 |
| 291 | 86.14 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 8 |
| 292 | 86.14 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 16 |
| 296 | 86.14 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 8 |
| 302 | 86.23 | temperature | 30.0 | 10 | < th | dose independent | rect. | 13 | 16 |
| 304 | 86.24 | radiation | 1.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 329 | 86.31 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 344 | 86.35 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 8 |
| 366 | 86.39 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 371 | 86.41 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 373 | 86.42 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 378 | 86.46 | temperature | 25.0 | 270 | > th | dose independent | rect. | 2 | 2 |
| 379 | 86.46 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 14 | 23 |
| 382 | 86.48 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 8 |
| 384 | 86.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 388 | 86.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 391 | 86.50 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 13 | 16 |
| 394 | 86.52 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 395 | 86.53 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 1 |
| 396 | 86.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 399 | 86.53 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 13 | 1 |
| 401 | 86.53 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 1 |
| 403 | 86.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 14 | 23 |
| 405 | 86.53 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 1 |
| 409 | 86.54 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 417 | 86.58 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 432 | 86.63 | humidity | 60.0 | 10 | > th | dose independent | rect. | 13 | 3 |
| 446 | 86.71 | humidity | 90.0 | 30 | < th | dose independent | rect. | 13 | 1 |
| 450 | 86.73 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 456 | 86.77 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 8 |
| 458 | 86.79 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 462 | 86.81 | temperature | 30.0 | 30 | < th | dose independent | rect. | 14 | 23 |
| 478 | 86.87 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 8 |
| 479 | 86.87 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 23 |
| 483 | 86.87 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 23 |
| 484 | 86.88 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 8 |
| 519 | 86.91 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 525 | 86.94 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 528 | 86.94 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 530 | 86.95 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 532 | 86.95 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 534 | 86.95 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 537 | 86.96 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 540 | 86.96 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 541 | 86.96 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 545 | 86.96 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 547 | 86.96 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 549 | 86.96 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 554 | 86.96 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 557 | 86.96 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 561 | 86.96 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 562 | 86.96 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 563 | 86.96 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 568 | 86.96 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 569 | 86.96 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 573 | 86.97 | wind | 9.0 | 30 | < th | dose independent | rect. | 14 | 23 |
| 575 | 86.97 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 577 | 86.98 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 579 | 86.99 | atmosphere | 1010.0 | 720 | > th | dose independent | rect. | 3 | 2 |
| 588 | 87.01 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 590 | 87.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 593 | 87.01 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 597 | 87.01 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 607 | 87.01 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 608 | 87.01 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 609 | 87.01 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 620 | 87.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 653 | 87.06 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 768 | 87.22 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 12 | 2 |
| 771 | 87.23 | temperature | 20.0 | 30 | < th | dose independent | rect. | 12 | 2 |
| 780 | 87.24 | atmosphere | 1010.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 782 | 87.25 | atmosphere | 1010.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 824 | 87.32 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 3 |
| 834 | 87.32 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 11 | 3 |
| 844 | 87.33 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 866 | 87.33 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 886 | 87.34 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 889 | 87.34 | atmosphere | 1010.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 910 | 87.36 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 911 | 87.36 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 971 | 87.36 | wind | 1.0 | 30 | > th | dose independent | rect. | 13 | 16 |
| 977 | 87.36 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 8 |