Os11g0183900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (Nucellin- like protein).
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Os11g0183900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (Nucellin- like protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.42 | 0.586 | 9.83 | -1.38 | 0.342 | 1.89 | 0.44 | 1.17 | -0.0347 | 21.1 | 0.5232 | 1442 | -- | -- |
| 156.12 | 0.582 | 9.83 | -1.26 | 0.309 | 1.68 | 0.505 | -- | -0.0375 | 20.8 | 0.5206 | 1452 | -- | -- |
| 155.54 | 0.581 | 9.83 | -1.42 | 0.323 | 1.92 | -- | 1.27 | -0.0395 | 21.1 | 0.4663 | 1450 | -- | -- |
| 156.88 | 0.583 | 9.83 | -1.28 | 0.294 | 1.69 | -- | -- | -0.0357 | 20.7 | 0.4688 | 1458 | -- | -- |
| 158.74 | 0.587 | 9.83 | -1.42 | -- | 2.06 | -- | 1.42 | -0.0489 | -- | 0.4199 | 1489 | -- | -- |
| 187.18 | 0.641 | 9.86 | -1.65 | 0.362 | -- | 0.328 | -- | -0.24 | 21 | -- | -- | -- | -- |
| 187.49 | 0.641 | 9.86 | -1.66 | 0.36 | -- | -- | -- | -0.241 | 21.4 | -- | -- | -- | -- |
| 159.96 | 0.589 | 9.81 | -1.29 | -- | 1.81 | -- | -- | -0.0252 | -- | 0.44 | 1496 | -- | -- |
| 195.62 | 0.651 | 9.82 | -- | 0.304 | 2.28 | -- | -- | 0.112 | 20.5 | 0.47 | 1455 | -- | -- |
| 195.06 | 0.653 | 9.85 | -1.66 | -- | -- | -- | -- | -0.242 | -- | -- | -- | -- | -- |
| 260.37 | 0.755 | 9.82 | -- | 0.36 | -- | -- | -- | -0.0556 | 21 | -- | -- | -- | -- |
| 198.38 | 0.656 | 9.8 | -- | -- | 2.49 | -- | -- | 0.147 | -- | 0.4634 | 1472 | -- | -- |
| 267.82 | 0.764 | 9.81 | -- | -- | -- | -- | -- | -0.0579 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 5 | 150.26 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 8 | 150.28 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 11 | 150.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 14 | 150.38 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 15 | 150.40 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 29 | 150.54 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 62 | 151.08 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 63 | 151.15 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 66 | 151.25 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 92 | 151.54 | radiation | 1 | 1440 | < th | dose dependent | sin | 19 | NA |
| 95 | 151.64 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 15 |
| 99 | 151.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 100 | 151.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 104 | 151.76 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 7 |
| 112 | 152.06 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 113 | 152.07 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 119 | 152.12 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 127 | 152.12 | radiation | 10 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 129 | 152.13 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 143 | 152.21 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 144 | 152.21 | radiation | 10 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 145 | 152.21 | radiation | 10 | 43200 | < th | dose dependent | rect. | 19 | 12 |
| 233 | 152.49 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 250 | 152.51 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 257 | 152.59 | radiation | 40 | 43200 | < th | dose independent | rect. | 24 | 10 |
| 258 | 152.59 | radiation | 40 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 259 | 152.60 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 266 | 152.60 | radiation | 40 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 285 | 152.65 | radiation | 10 | 43200 | < th | dose independent | sin | 9 | NA |
| 286 | 152.67 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 333 | 152.82 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 334 | 152.83 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 348 | 152.88 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 374 | 152.97 | radiation | 40 | 43200 | < th | dose independent | sin | 10 | NA |
| 529 | 153.42 | radiation | 30 | 43200 | > th | dose dependent | rect. | 16 | 18 |
| 531 | 153.43 | radiation | 20 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 532 | 153.43 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 583 | 153.58 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 594 | 153.63 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 11 |
| 599 | 153.65 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 678 | 153.78 | radiation | 30 | 43200 | > th | dose dependent | sin | 11 | NA |
| 843 | 154.07 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 850 | 154.07 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |
| 883 | 154.13 | radiation | 1 | 1440 | < th | dose independent | sin | 17 | NA |
| 960 | 154.23 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 982 | 154.26 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 2 |