Os11g0182900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os11g0182900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 379.57 | 0.915 | 8.13 | 2.31 | 4.1 | -3.6 | -0.633 | -0.336 | 0.875 | 1.93 | 18.4 | 4890 | -- | -- |
| 379.68 | 0.908 | 8.14 | 2.3 | 4.1 | -3.5 | -0.627 | -- | 0.884 | 1.93 | 18.38 | 4890 | -- | -- |
| 381.1 | 0.909 | 8.13 | 2.32 | 4.1 | -3.61 | -- | -0.321 | 0.874 | 1.93 | 18.38 | 4890 | -- | -- |
| 381.18 | 0.909 | 8.14 | 2.31 | 4.1 | -3.51 | -- | -- | 0.874 | 1.94 | 18.37 | 4890 | -- | -- |
| 1368.18 | 1.72 | 8.08 | 2.5 | -- | -4.21 | -- | -0.608 | 0.927 | -- | 18.3 | 3907 | -- | -- |
| 543.34 | 1.09 | 7.97 | 4.33 | 4.14 | -- | -0.627 | -- | 1.62 | 1.92 | -- | -- | -- | -- |
| 544.86 | 1.09 | 7.97 | 4.35 | 4.14 | -- | -- | -- | 1.63 | 1.93 | -- | -- | -- | -- |
| 1368.17 | 1.72 | 8.1 | 2.47 | -- | -4.16 | -- | -- | 0.952 | -- | 18.4 | 3856 | -- | -- |
| 408.24 | 0.941 | 8.27 | -- | 4.09 | -4.26 | -- | -- | 0.277 | 1.93 | 17.25 | 47520 | -- | -- |
| 1581.32 | 1.86 | 7.93 | 4.52 | -- | -- | -- | -- | 1.72 | -- | -- | -- | -- | -- |
| 1043.95 | 1.51 | 8.08 | -- | 4.23 | -- | -- | -- | 1.14 | 1.95 | -- | -- | -- | -- |
| 1414.9 | 1.75 | 8.25 | -- | -- | -4.48 | -- | -- | 0.307 | -- | 17.29 | 47520 | -- | -- |
| 2120.92 | 2.15 | 8.04 | -- | -- | -- | -- | -- | 1.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 343.98 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 2 | 345.08 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 3 | 346.30 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 4 | 347.55 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 6 | 347.78 | radiation | 20 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 11 | 348.67 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 13 | 349.18 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 36 | 350.92 | wind | 7 | 43200 | > th | dose dependent | sin | 21 | NA |
| 39 | 351.09 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 10 |
| 40 | 351.18 | wind | 9 | 43200 | > th | dose independent | sin | 22 | NA |
| 41 | 351.20 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 12 |
| 53 | 351.37 | radiation | 30 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 57 | 351.41 | radiation | 30 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 58 | 351.41 | radiation | 30 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 60 | 351.42 | radiation | 30 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 63 | 351.44 | radiation | 30 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 67 | 351.47 | radiation | 30 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 87 | 351.96 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 11 |
| 105 | 352.27 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 139 | 352.73 | wind | 9 | 43200 | < th | dose independent | sin | 22 | NA |
| 159 | 353.12 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 15 |
| 166 | 353.21 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 168 | 353.23 | wind | 9 | 43200 | > th | dose independent | sin | 14 | NA |
| 217 | 353.87 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 237 | 353.99 | humidity | 70 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 251 | 354.16 | wind | 9 | 43200 | > th | dose dependent | sin | 16 | NA |
| 278 | 354.30 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 16 |
| 281 | 354.33 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 302 | 354.50 | wind | 9 | 43200 | < th | dose independent | sin | 14 | NA |
| 308 | 354.56 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 317 | 354.66 | humidity | 70 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 342 | 354.90 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 20 |
| 361 | 355.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 386 | 355.13 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 19 |
| 404 | 355.29 | humidity | 70 | 43200 | < th | dose independent | sin | 6 | NA |
| 449 | 355.53 | radiation | 30 | 43200 | < th | dose independent | sin | 10 | NA |
| 450 | 355.54 | humidity | 70 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 457 | 355.58 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 468 | 355.72 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 19 |
| 520 | 355.98 | humidity | 80 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 577 | 356.36 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 582 | 356.38 | humidity | 70 | 43200 | > th | dose independent | sin | 6 | NA |
| 586 | 356.38 | humidity | 80 | 43200 | < th | dose dependent | rect. | 17 | 18 |
| 668 | 356.76 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 683 | 356.82 | humidity | 80 | 43200 | < th | dose dependent | sin | 12 | NA |
| 752 | 357.17 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 763 | 357.23 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 882 | 357.71 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 979 | 358.13 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |