Os11g0182500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os11g0182500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 306.35 | 0.822 | 10.3 | 4.45 | 3.73 | 0.4 | -1.12 | -4.35 | 1.22 | 15.7 | 2.669 | 581 | -- | -- |
| 336.03 | 0.854 | 10.2 | 4.5 | 3.74 | 0.594 | -0.746 | -- | 1.29 | 15.5 | 3.167 | 7963 | -- | -- |
| 307.79 | 0.817 | 10.3 | 4.44 | 3.68 | 0.45 | -- | -4.56 | 1.23 | 15.6 | 2.4 | 623 | -- | -- |
| 331.4 | 0.848 | 10.2 | 4.25 | 3.78 | 1.11 | -- | -- | 1.31 | 15.4 | 4 | 13136 | -- | -- |
| 792.65 | 1.32 | 10.2 | 4.9 | -- | -1.85 | -- | 0.519 | 1.15 | -- | 3.053 | 1072 | -- | -- |
| 344.98 | 0.871 | 10.2 | 4.42 | 3.66 | -- | -1.02 | -- | 1.21 | 15.3 | -- | -- | -- | -- |
| 348.26 | 0.874 | 10.2 | 4.4 | 3.65 | -- | -- | -- | 1.2 | 15.4 | -- | -- | -- | -- |
| 793.98 | 1.32 | 10.2 | 4.92 | -- | -1.86 | -- | -- | 1.14 | -- | 3.053 | 1072 | -- | -- |
| 454.74 | 0.993 | 10.4 | -- | 3.61 | 3.16 | -- | -- | 0.203 | 15.1 | 8.8 | 47520 | -- | -- |
| 1100.72 | 1.55 | 10.2 | 4.24 | -- | -- | -- | -- | 1.11 | -- | -- | -- | -- | -- |
| 857.89 | 1.37 | 10.3 | -- | 3.57 | -- | -- | -- | 0.714 | 15.4 | -- | -- | -- | -- |
| 1208.11 | 1.62 | 10.4 | -- | -- | 3.2 | -- | -- | -0.0464 | -- | 6.852 | 47520 | -- | -- |
| 1575.53 | 1.85 | 10.3 | -- | -- | -- | -- | -- | 0.637 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 284.78 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 7 |
| 2 | 284.82 | wind | 5 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 3 | 284.93 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 7 |
| 5 | 285.09 | wind | 5 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 6 | 285.31 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 11 | 286.11 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 13 | 286.14 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 15 | 286.20 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 25 | 286.83 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 10 |
| 29 | 286.92 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 37 | 287.09 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 42 | 287.19 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 67 | 287.77 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 159 | 288.99 | wind | 9 | 43200 | < th | dose independent | sin | 15 | NA |
| 167 | 289.09 | wind | 9 | 43200 | > th | dose independent | sin | 15 | NA |
| 215 | 289.67 | wind | 7 | 43200 | > th | dose dependent | sin | 15 | NA |
| 253 | 290.09 | wind | 5 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 754 | 292.85 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 17 |