Os11g0182200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os11g0182200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 204.54 | 0.672 | 10 | -0.519 | 1.69 | -0.605 | 0.207 | -8.09 | 0.23 | 15 | 7.1 | 3604 | 17.2 | 3.81 |
| 261.58 | 0.753 | 10.1 | -0.767 | 1.66 | -0.825 | 0.0728 | -- | -0.0788 | 14.7 | 6.494 | 15942 | 17.6 | 3.46 |
| 204.05 | 0.665 | 10 | -0.528 | 1.69 | -0.59 | -- | -8.17 | 0.231 | 15 | 7.082 | 3598 | 17.3 | 3.72 |
| 256.37 | 0.746 | 10.2 | -0.715 | 1.63 | -0.873 | -- | -- | -0.183 | 14.7 | 6.371 | 14576 | 18.5 | 2.99 |
| 366.91 | 0.892 | 10 | -0.534 | -- | -0.661 | -- | -7.59 | 0.238 | -- | 7.026 | 3621 | 17.4 | 3.62 |
| 281.61 | 0.787 | 10.2 | -0.59 | 1.62 | -- | 0.864 | -- | 0.0616 | 15 | -- | -- | -- | -- |
| 284.09 | 0.789 | 10.2 | -0.571 | 1.62 | -- | -- | -- | 0.0668 | 15 | -- | -- | -- | -- |
| 398.41 | 0.93 | 10.2 | -0.75 | -- | -0.992 | -- | -- | -0.195 | -- | 6.304 | 13697 | 18.5 | 3.07 |
| 261.61 | 0.753 | 10.2 | -- | 1.59 | -0.96 | -- | -- | -0.153 | 14.5 | 6.498 | 12598 | 19.2 | 1.89 |
| 434.85 | 0.974 | 10.2 | -0.64 | -- | -- | -- | -- | 0.0246 | -- | -- | -- | -- | -- |
| 292.69 | 0.8 | 10.2 | -- | 1.63 | -- | -- | -- | 0.13 | 15 | -- | -- | -- | -- |
| 405.6 | 0.938 | 10.2 | -- | -- | -0.997 | -- | -- | -0.158 | -- | 6.413 | 12282 | 19.1 | 1.69 |
| 445.67 | 0.985 | 10.2 | -- | -- | -- | -- | -- | 0.0957 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 209.96 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 2 | 211.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 17 |
| 4 | 211.83 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 10 | 212.42 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 16 |
| 24 | 213.18 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 27 | 213.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 11 |
| 49 | 213.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 51 | 213.96 | humidity | 90.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 52 | 213.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 54 | 214.06 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 72 | 214.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 96 | 215.33 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 19 | 8 |
| 110 | 215.70 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 112 | 215.72 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 125 | 215.92 | wind | 9.0 | 4320 | < th | dose independent | rect. | 16 | 11 |
| 129 | 215.95 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 136 | 216.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 137 | 216.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 144 | 216.20 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 149 | 216.26 | wind | 9.0 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 158 | 216.34 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 176 | 216.54 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 13 |
| 212 | 216.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 14 | 17 |
| 227 | 217.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 356 | 218.10 | humidity | 90.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 363 | 218.14 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 439 | 218.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 447 | 218.81 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 469 | 218.95 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 474 | 218.98 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 477 | 218.99 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 479 | 218.99 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 485 | 219.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 487 | 219.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 499 | 219.09 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 540 | 219.40 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 549 | 219.45 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 566 | 219.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 567 | 219.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 627 | 219.97 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 18 |
| 644 | 220.09 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 646 | 220.10 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 731 | 220.57 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 764 | 220.84 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 806 | 221.04 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 818 | 221.13 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 829 | 221.17 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 832 | 221.19 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 854 | 221.21 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 932 | 221.59 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 8 |
| 990 | 221.88 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |