Os11g0181200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0181200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 240.37 | 0.728 | 3.53 | -0.599 | 0.783 | -0.758 | -0.878 | 0.809 | -0.313 | 7.07 | 68 | 25 | -- | -- |
| 242.56 | 0.725 | 3.53 | -0.558 | 0.761 | -0.671 | -0.899 | -- | -0.298 | 7.47 | 68.07 | 24 | -- | -- |
| 242.34 | 0.725 | 3.53 | -0.615 | 0.771 | -0.732 | -- | 0.808 | -0.307 | 7.28 | 67.57 | 24 | -- | -- |
| 244.73 | 0.729 | 3.53 | -0.583 | 0.769 | -0.695 | -- | -- | -0.299 | 7.34 | 68 | 24 | -- | -- |
| 270.57 | 0.77 | 3.54 | -0.601 | -- | -0.631 | -- | 0.966 | -0.269 | -- | 62.99 | 15 | -- | -- |
| 254.54 | 0.748 | 3.52 | -0.559 | 0.788 | -- | -0.599 | -- | -0.234 | 10 | -- | -- | -- | -- |
| 255.91 | 0.749 | 3.52 | -0.581 | 0.789 | -- | -- | -- | -0.235 | 10.1 | -- | -- | -- | -- |
| 273.67 | 0.774 | 3.54 | -0.569 | -- | -0.606 | -- | -- | -0.264 | -- | 62.99 | 15 | -- | -- |
| 253.73 | 0.742 | 3.52 | -- | 0.771 | -0.714 | -- | -- | -0.243 | 7.3 | 67.97 | 24 | -- | -- |
| 293.55 | 0.801 | 3.54 | -0.592 | -- | -- | -- | -- | -0.236 | -- | -- | -- | -- | -- |
| 264.81 | 0.761 | 3.5 | -- | 0.792 | -- | -- | -- | -0.17 | 10.2 | -- | -- | -- | -- |
| 282.22 | 0.785 | 3.53 | -- | -- | -0.616 | -- | -- | -0.201 | -- | 62.99 | 15 | -- | -- |
| 302.79 | 0.812 | 3.52 | -- | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 229.18 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 6 | 230.70 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 20 | 234.00 | temperature | 25 | 90 | < th | dose dependent | rect. | 10 | 5 |
| 21 | 234.02 | radiation | 1 | 1440 | < th | dose independent | rect. | 17 | 13 |
| 22 | 234.04 | radiation | 1 | 1440 | > th | dose independent | rect. | 17 | 13 |
| 26 | 234.42 | humidity | 90 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 28 | 234.51 | humidity | 70 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 32 | 234.60 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 1 |
| 34 | 234.66 | humidity | 90 | 10 | < th | dose dependent | rect. | 24 | 12 |
| 37 | 234.69 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 40 | 234.73 | humidity | 70 | 30 | > th | dose dependent | rect. | 1 | 15 |
| 43 | 234.79 | humidity | 80 | 30 | > th | dose independent | rect. | 1 | 17 |
| 45 | 234.82 | humidity | 80 | 30 | < th | dose independent | rect. | 7 | 5 |
| 48 | 234.98 | humidity | 80 | 30 | > th | dose independent | rect. | 1 | 15 |
| 50 | 235.06 | humidity | 90 | 10 | < th | dose dependent | rect. | 22 | 14 |
| 54 | 235.14 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 16 |
| 55 | 235.17 | humidity | 60 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 59 | 235.21 | humidity | 70 | 720 | > th | dose dependent | rect. | 1 | 13 |
| 69 | 235.43 | humidity | 60 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 75 | 235.59 | humidity | 80 | 30 | > th | dose independent | rect. | 1 | 13 |
| 77 | 235.60 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 86 | 235.69 | wind | 1 | 90 | < th | dose independent | rect. | 9 | 4 |
| 90 | 235.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 7 |
| 91 | 235.73 | humidity | 70 | 30 | > th | dose dependent | sin | 3 | NA |
| 92 | 235.73 | humidity | 90 | 10 | < th | dose dependent | sin | 5 | NA |
| 98 | 235.88 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 100 | 235.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 4 |
| 104 | 235.94 | radiation | 10 | 14400 | < th | dose dependent | rect. | 11 | 3 |
| 117 | 236.01 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 125 | 236.09 | humidity | 50 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 129 | 236.11 | humidity | 80 | 270 | > th | dose independent | rect. | 23 | 15 |
| 137 | 236.18 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 149 | 236.29 | radiation | 20 | 30 | > th | dose independent | rect. | 16 | 20 |
| 155 | 236.35 | radiation | 20 | 30 | > th | dose independent | rect. | 7 | 5 |
| 175 | 236.37 | humidity | 50 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 179 | 236.38 | humidity | 50 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 183 | 236.38 | humidity | 50 | 14400 | > th | dose independent | rect. | 22 | 14 |
| 195 | 236.43 | humidity | 90 | 720 | < th | dose independent | rect. | 3 | 1 |
| 209 | 236.52 | humidity | 60 | 14400 | < th | dose dependent | rect. | 18 | 17 |
| 232 | 236.58 | humidity | 80 | 720 | > th | dose independent | rect. | 1 | 12 |
| 243 | 236.69 | temperature | 15 | 90 | > th | dose independent | rect. | 6 | 6 |
| 245 | 236.73 | humidity | 70 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 252 | 236.79 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 258 | 236.84 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 295 | 237.00 | humidity | 60 | 14400 | < th | dose dependent | rect. | 19 | 15 |
| 311 | 237.09 | humidity | 80 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 312 | 237.10 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 314 | 237.11 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 323 | 237.15 | humidity | 80 | 270 | < th | dose independent | rect. | 7 | 1 |
| 408 | 237.30 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 411 | 237.32 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 441 | 237.40 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 457 | 237.42 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 483 | 237.45 | humidity | 70 | 30 | > th | dose dependent | rect. | 23 | 19 |
| 494 | 237.49 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 498 | 237.50 | humidity | 60 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 500 | 237.50 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 512 | 237.52 | humidity | 80 | 30 | > th | dose independent | sin | 2 | NA |
| 513 | 237.52 | humidity | 50 | 14400 | < th | dose independent | sin | 1 | NA |
| 518 | 237.53 | humidity | 50 | 14400 | > th | dose independent | sin | 4 | NA |
| 540 | 237.53 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 555 | 237.54 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 14 |
| 573 | 237.55 | humidity | 50 | 14400 | > th | dose independent | sin | 9 | NA |
| 575 | 237.55 | humidity | 80 | 30 | < th | dose independent | sin | 2 | NA |
| 579 | 237.55 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 626 | 237.57 | humidity | 80 | 270 | < th | dose independent | rect. | 6 | 4 |
| 748 | 237.73 | humidity | 50 | 14400 | < th | dose independent | no | NA | NA |
| 859 | 237.74 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 877 | 237.78 | humidity | 50 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 878 | 237.78 | humidity | 70 | 720 | > th | dose dependent | sin | 5 | NA |
| 884 | 237.80 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 911 | 237.80 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 3 |
| 913 | 237.81 | humidity | 50 | 14400 | > th | dose independent | no | NA | NA |
| 936 | 237.81 | humidity | 50 | 14400 | > th | dose independent | rect. | 1 | 21 |
| 947 | 237.81 | humidity | 50 | 14400 | > th | dose independent | rect. | 22 | 22 |
| 960 | 237.81 | humidity | 60 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 1000 | 237.84 | humidity | 50 | 14400 | < th | dose dependent | rect. | 14 | 22 |