Os11g0177400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os11g0177400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.24 | 0.444 | 11.5 | -1.05 | 1.34 | -1.07 | 0.518 | -0.591 | 0.0109 | 8.09 | 81 | 701 | -- | -- |
| 89.79 | 0.441 | 11.5 | -1.08 | 1.36 | -1.08 | 0.222 | -- | 0.00396 | 8.06 | 81.74 | 691 | -- | -- |
| 89.77 | 0.441 | 11.5 | -1.06 | 1.35 | -1.07 | -- | -0.264 | 0.00747 | 8.04 | 81.43 | 689 | -- | -- |
| 89.93 | 0.442 | 11.5 | -1.08 | 1.36 | -1.08 | -- | -- | 0.00434 | 8.05 | 81.8 | 689 | -- | -- |
| 117.99 | 0.506 | 11.6 | -1.1 | -- | -0.725 | -- | 0.329 | 0.0475 | -- | 72.79 | 1430 | -- | -- |
| 115.97 | 0.505 | 11.5 | -1.07 | 0.675 | -- | 0.247 | -- | 0.0405 | 8.21 | -- | -- | -- | -- |
| 116.16 | 0.505 | 11.5 | -1.06 | 0.674 | -- | -- | -- | 0.0404 | 8.21 | -- | -- | -- | -- |
| 115.86 | 0.501 | 11.6 | -1.21 | -- | -0.832 | -- | -- | -0.0596 | -- | 72 | 1429 | -- | -- |
| 119.56 | 0.509 | 11.5 | -- | 1.37 | -1.11 | -- | -- | 0.0373 | 7.97 | 82.04 | 650 | -- | -- |
| 141.25 | 0.555 | 11.6 | -1.06 | -- | -- | -- | -- | 0.0481 | -- | -- | -- | -- | -- |
| 145.82 | 0.565 | 11.5 | -- | 0.669 | -- | -- | -- | 0.159 | 8.32 | -- | -- | -- | -- |
| 153.22 | 0.577 | 11.6 | -- | -- | -0.714 | -- | -- | 0.0824 | -- | 74.08 | 1433 | -- | -- |
| 170.66 | 0.61 | 11.5 | -- | -- | -- | -- | -- | 0.165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.88 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 3 | 85.16 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 10 | 85.77 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 8 |
| 19 | 86.17 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 14 |
| 26 | 86.50 | humidity | 60 | 720 | > th | dose dependent | sin | 17 | NA |
| 28 | 86.63 | humidity | 90 | 720 | < th | dose dependent | sin | 15 | NA |
| 32 | 86.67 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 17 |
| 35 | 86.71 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 7 |
| 40 | 86.77 | humidity | 70 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 50 | 86.92 | humidity | 80 | 720 | > th | dose independent | rect. | 4 | 18 |
| 51 | 86.92 | humidity | 80 | 720 | < th | dose dependent | sin | 12 | NA |
| 60 | 87.00 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 14 |
| 62 | 87.04 | humidity | 70 | 720 | > th | dose independent | sin | 15 | NA |
| 65 | 87.06 | humidity | 80 | 720 | < th | dose independent | rect. | 14 | 8 |
| 90 | 87.30 | humidity | 80 | 720 | > th | dose independent | sin | 19 | NA |
| 93 | 87.32 | humidity | 80 | 720 | < th | dose independent | sin | 19 | NA |
| 95 | 87.34 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 102 | 87.40 | humidity | 80 | 720 | > th | dose independent | rect. | 2 | 20 |
| 144 | 87.74 | humidity | 70 | 720 | < th | dose independent | sin | 15 | NA |
| 167 | 87.85 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 18 |
| 170 | 87.86 | humidity | 60 | 720 | > th | dose dependent | rect. | 10 | 17 |
| 200 | 87.96 | humidity | 80 | 720 | < th | dose independent | rect. | 6 | 16 |
| 214 | 88.01 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 243 | 88.14 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 245 | 88.16 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 19 |
| 266 | 88.21 | humidity | 70 | 720 | > th | dose dependent | rect. | 4 | 19 |
| 309 | 88.38 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 319 | 88.42 | humidity | 60 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 362 | 88.58 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 21 |
| 435 | 88.88 | humidity | 80 | 720 | > th | dose independent | rect. | 4 | 23 |
| 511 | 89.13 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 23 |
| 578 | 89.28 | humidity | 60 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 587 | 89.30 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 715 | 89.58 | humidity | 80 | 720 | > th | dose independent | no | NA | NA |
| 771 | 89.73 | humidity | 80 | 720 | > th | dose independent | rect. | 15 | 23 |
| 853 | 89.97 | humidity | 60 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 889 | 90.06 | humidity | 60 | 720 | > th | dose dependent | no | NA | NA |
| 950 | 90.21 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 999 | 90.35 | humidity | 90 | 720 | < th | dose dependent | rect. | 5 | 19 |