Os11g0177200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0177200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.05 | 0.488 | 11.3 | -0.971 | 0.691 | 0.744 | -0.431 | 2.45 | -0.176 | 7.67 | 44.17 | 2792 | -- | -- |
| 114.63 | 0.499 | 11.3 | -0.625 | 0.654 | 0.764 | -0.308 | -- | -0.135 | 7.58 | 42.33 | 2756 | -- | -- |
| 108.57 | 0.485 | 11.3 | -0.973 | 0.69 | 0.746 | -- | 2.42 | -0.174 | 7.65 | 44.21 | 2792 | -- | -- |
| 114.59 | 0.499 | 11.3 | -0.619 | 0.675 | 0.796 | -- | -- | -0.107 | 7.52 | 41.4 | 2753 | -- | -- |
| 128.87 | 0.529 | 11.3 | -0.82 | -- | 1.07 | -- | 1.86 | -0.0497 | -- | 36.97 | 2157 | -- | -- |
| 138.53 | 0.552 | 11.3 | -0.685 | 0.736 | -- | -0.349 | -- | -0.229 | 8.16 | -- | -- | -- | -- |
| 138.9 | 0.552 | 11.3 | -0.695 | 0.736 | -- | -- | -- | -0.229 | 8.19 | -- | -- | -- | -- |
| 131.12 | 0.533 | 11.3 | -0.629 | -- | 1.01 | -- | -- | 0.0423 | -- | 40.24 | 2146 | -- | -- |
| 122.63 | 0.516 | 11.3 | -- | 0.677 | 0.753 | -- | -- | -0.0344 | 7.64 | 40 | 2725 | -- | -- |
| 168.78 | 0.607 | 11.4 | -0.689 | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
| 151.62 | 0.576 | 11.3 | -- | 0.733 | -- | -- | -- | -0.151 | 8.26 | -- | -- | -- | -- |
| 137.16 | 0.545 | 11.3 | -- | -- | 1.16 | -- | -- | 0.108 | -- | 40.06 | 2176 | -- | -- |
| 181.3 | 0.628 | 11.3 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.51 | wind | 3 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 3 | 100.10 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 5 | 100.54 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 15 | 101.31 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 26 | 101.73 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 31 | 101.79 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 54 | 102.50 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 56 | 102.54 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 62 | 102.71 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 66 | 102.76 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 70 | 102.84 | humidity | 70 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 94 | 103.16 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 124 | 103.68 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 126 | 103.68 | temperature | 30 | 270 | < th | dose independent | rect. | 20 | 17 |
| 136 | 103.80 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 139 | 103.87 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 201 | 104.43 | humidity | 70 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 202 | 104.45 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 204 | 104.46 | humidity | 70 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 225 | 104.50 | humidity | 70 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 232 | 104.52 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 246 | 104.55 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 255 | 104.55 | humidity | 70 | 14400 | > th | dose independent | rect. | 10 | 17 |
| 260 | 104.56 | humidity | 70 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 266 | 104.57 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 276 | 104.61 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 347 | 104.80 | humidity | 70 | 14400 | < th | dose independent | sin | 20 | NA |
| 386 | 104.91 | humidity | 70 | 14400 | > th | dose independent | sin | 22 | NA |
| 398 | 104.91 | humidity | 60 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 400 | 104.92 | humidity | 70 | 14400 | < th | dose independent | no | NA | NA |
| 483 | 104.96 | humidity | 70 | 14400 | > th | dose independent | no | NA | NA |
| 493 | 104.96 | humidity | 70 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 498 | 104.96 | humidity | 70 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 502 | 104.96 | humidity | 70 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 507 | 104.96 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 570 | 105.03 | wind | 3 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 639 | 105.18 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 649 | 105.21 | humidity | 70 | 14400 | > th | dose independent | rect. | 24 | 16 |
| 657 | 105.22 | humidity | 70 | 14400 | > th | dose independent | rect. | 3 | 13 |
| 800 | 105.53 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 820 | 105.57 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 837 | 105.58 | humidity | 80 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 842 | 105.60 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 884 | 105.71 | humidity | 80 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 944 | 105.82 | humidity | 60 | 14400 | > th | dose dependent | rect. | 9 | 12 |
| 957 | 105.85 | humidity | 60 | 14400 | > th | dose dependent | rect. | 9 | 14 |
| 984 | 105.93 | humidity | 60 | 14400 | > th | dose dependent | rect. | 6 | 15 |
| 992 | 105.95 | humidity | 60 | 14400 | > th | dose dependent | rect. | 6 | 17 |