Os11g0175900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0175900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.42 | 0.299 | 9.71 | 2.18 | 0.399 | -0.796 | -0.00434 | 1.84 | 0.853 | 23.7 | 27.4 | 1459 | -- | -- |
| 42.07 | 0.302 | 9.78 | 1.68 | 0.415 | -0.754 | 0.0685 | -- | 0.784 | 23.1 | 26.8 | 7486 | -- | -- |
| 40.34 | 0.296 | 9.72 | 2.2 | 0.387 | -0.802 | -- | 2 | 0.821 | 23.9 | 27.73 | 1471 | -- | -- |
| 41.82 | 0.301 | 9.78 | 1.63 | 0.414 | -0.738 | -- | -- | 0.752 | 23.6 | 26.83 | 7330 | -- | -- |
| 49.72 | 0.328 | 9.72 | 2.16 | -- | -0.802 | -- | 1.91 | 0.806 | -- | 27.8 | 1519 | -- | -- |
| 61.96 | 0.369 | 9.83 | 1.3 | 0.376 | -- | -0.0491 | -- | 0.497 | 23.6 | -- | -- | -- | -- |
| 61.97 | 0.369 | 9.83 | 1.31 | 0.376 | -- | -- | -- | 0.497 | 23.6 | -- | -- | -- | -- |
| 51.7 | 0.335 | 9.77 | 1.63 | -- | -0.701 | -- | -- | 0.741 | -- | 26.9 | 7404 | -- | -- |
| 100.76 | 0.468 | 9.84 | -- | 0.425 | -0.341 | -- | -- | 0.459 | 23.6 | 29.2 | 8463 | -- | -- |
| 70.86 | 0.393 | 9.82 | 1.32 | -- | -- | -- | -- | 0.502 | -- | -- | -- | -- | -- |
| 106.88 | 0.484 | 9.86 | -- | 0.391 | -- | -- | -- | 0.352 | 23.8 | -- | -- | -- | -- |
| 107.64 | 0.485 | 9.85 | -- | -- | -0.307 | -- | -- | 0.396 | -- | 26.9 | 7404 | -- | -- |
| 116.53 | 0.504 | 9.85 | -- | -- | -- | -- | -- | 0.356 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.25 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 16 | 40.51 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 19 | NA |
| 17 | 40.51 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 26 | 40.55 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 99 | 40.81 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 20 |
| 125 | 40.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 206 | 41.03 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 238 | 41.14 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 242 | 41.16 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 260 | 41.24 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 266 | 41.29 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 267 | 41.29 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 284 | 41.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 294 | 41.46 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 297 | 41.50 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 303 | 41.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 304 | 41.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 311 | 41.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 316 | 41.62 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 331 | 41.70 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 354 | 41.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 376 | 42.20 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 379 | 42.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 382 | 42.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 392 | 42.31 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 443 | 42.43 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 551 | 42.59 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 683 | 42.76 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 716 | 42.81 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 724 | 42.83 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 4 |
| 735 | 42.85 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 798 | 43.02 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 811 | 43.08 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 821 | 43.09 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 825 | 43.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 22 |
| 879 | 43.28 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 893 | 43.33 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 896 | 43.35 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 914 | 43.40 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 917 | 43.40 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 942 | 43.44 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 963 | 43.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 993 | 43.57 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 999 | 43.58 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 21 |