Os11g0174000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Adaptin, N-terminal domain containing protein.
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Os11g0174000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Adaptin, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.52 | 0.366 | 10.3 | 2.22 | 0.0218 | -0.906 | -0.587 | 1.06 | 0.685 | 7.4 | 21 | 15 | -- | -- |
| 61.29 | 0.367 | 10.3 | 2.03 | 0.0476 | -0.824 | -0.675 | -- | 0.625 | 5.73 | 21 | 15 | -- | -- |
| 61.41 | 0.365 | 10.3 | 2.19 | 0.0362 | -0.868 | -- | 1.04 | 0.681 | 3.96 | 21.14 | 14 | -- | -- |
| 62.31 | 0.368 | 10.3 | 2.02 | 0.0562 | -0.787 | -- | -- | 0.624 | 3.27 | 20.82 | 14 | -- | -- |
| 61.48 | 0.365 | 10.3 | 2.2 | -- | -0.9 | -- | 1.03 | 0.686 | -- | 21.12 | 14 | -- | -- |
| 71.7 | 0.397 | 10.4 | 1.85 | 0.355 | -- | -0.143 | -- | 0.488 | 2.79 | -- | -- | -- | -- |
| 71.77 | 0.397 | 10.4 | 1.85 | 0.353 | -- | -- | -- | 0.488 | 2.68 | -- | -- | -- | -- |
| 62.43 | 0.368 | 10.3 | 2.03 | -- | -0.837 | -- | -- | 0.633 | -- | 20.87 | 14 | -- | -- |
| 161.86 | 0.596 | 10.4 | -- | 0.327 | -0.161 | -- | -- | 0.298 | 2.72 | 24.1 | 3 | -- | -- |
| 79.05 | 0.415 | 10.4 | 1.87 | -- | -- | -- | -- | 0.497 | -- | -- | -- | -- | -- |
| 162.27 | 0.596 | 10.4 | -- | 0.39 | -- | -- | -- | 0.282 | 2.73 | -- | -- | -- | -- |
| 165.83 | 0.602 | 10.4 | -- | -- | -0.462 | -- | -- | 0.332 | -- | 24.1 | 3 | -- | -- |
| 171.11 | 0.611 | 10.4 | -- | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.40 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 2 | 59.49 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 12 | 59.98 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 22 | 60.08 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 25 | 60.11 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 48 | 60.32 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 54 | 60.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 65 | 60.43 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 94 | 60.61 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 105 | 60.68 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 114 | 60.74 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 151 | 61.04 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 178 | 61.16 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 183 | 61.19 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 190 | 61.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 193 | 61.24 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 197 | 61.25 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 200 | 61.25 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 202 | 61.26 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 220 | 61.34 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 222 | 61.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 223 | 61.35 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 229 | 61.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 21 |
| 232 | 61.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 237 | 61.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 239 | 61.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 242 | 61.41 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 246 | 61.41 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 247 | 61.41 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 252 | 61.42 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 294 | 61.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 308 | 61.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 325 | 61.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 334 | 61.57 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 360 | 61.64 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 361 | 61.64 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 362 | 61.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 384 | 61.69 | radiation | 1 | 1440 | < th | dose dependent | sin | 19 | NA |
| 408 | 61.73 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 418 | 61.75 | temperature | 20 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 420 | 61.76 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 448 | 61.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 469 | 61.85 | humidity | 90 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 480 | 61.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 587 | 62.04 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 19 |
| 629 | 62.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 640 | 62.12 | temperature | 25 | 1440 | > th | dose dependent | sin | 16 | NA |
| 723 | 62.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 760 | 62.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 770 | 62.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 780 | 62.34 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 781 | 62.34 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 782 | 62.34 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 785 | 62.34 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 817 | 62.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 818 | 62.40 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 866 | 62.48 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 879 | 62.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 889 | 62.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 900 | 62.52 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 914 | 62.53 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 924 | 62.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 933 | 62.55 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 953 | 62.58 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 956 | 62.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 961 | 62.59 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 973 | 62.61 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 998 | 62.63 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 23 |