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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0173800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.97 (0.042) R2 : 0.0626
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.573 (0.106) R2dC : 0.0605 R2C : 0.0589
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.104 (0.0883) R2dN8 : 0.00368 R2N8 : 0.00216
σ : 0.792
deviance : 286.35
__
_____
C
peak time of C : 20.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
272.76 0.776 4.02 -0.236 0.561 1.59 -0.538 -5 0.183 19.8 49.84 1490 -- --
284.44 0.792 3.97 0.0852 0.58 -0.336 -0.607 -- 0.11 20.1 49.84 1490 -- --
273.49 0.77 4.03 -0.222 0.558 1.58 -- -5.07 0.18 20.1 50 1480 -- --
275.6 0.773 3.97 0.317 0.58 -1.05 -- -- 0.109 20.1 45 3389 -- --
289.62 0.793 4.01 -0.238 -- 1.61 -- -4.87 0.184 -- 49.17 1840 -- --
285.29 0.792 3.97 0.0627 0.575 -- -0.568 -- 0.114 20.2 -- -- -- --
286.19 0.792 3.97 0.0776 0.573 -- -- -- 0.113 20.5 -- -- -- --
295.64 0.801 3.96 0.282 -- -0.971 -- -- 0.0854 -- 45.53 3349 -- --
277.59 0.776 3.98 -- 0.604 -0.878 -- -- 0.068 20.4 45 3387 -- --
304.54 0.815 3.96 0.0749 -- -- -- -- 0.107 -- -- -- -- --
286.35 0.792 3.97 -- 0.573 -- -- -- 0.104 20.5 -- -- -- --
297.41 0.803 3.97 -- -- -0.83 -- -- 0.0649 -- 45.67 3340 -- --
304.69 0.815 3.96 -- -- -- -- -- 0.0987 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 268.55 radiation 10 1440 < th dose independent rect. 17 13
2 268.95 radiation 10 1440 < th dose independent rect. 17 5
4 268.99 radiation 10 1440 < th dose independent rect. 17 7
14 269.91 temperature 10 30 > th dose dependent rect. 8 11
16 270.29 humidity 70 720 > th dose independent rect. 17 14
17 270.41 humidity 70 1440 > th dose independent rect. 17 18
18 270.42 humidity 70 720 > th dose independent rect. 17 5
19 270.82 radiation 10 1440 > th dose dependent rect. 17 13
20 270.95 radiation 10 1440 > th dose dependent rect. 17 1
33 271.04 temperature 20 30 > th dose independent rect. 8 11
34 271.05 wind 7 14400 < th dose independent rect. 23 12
36 271.19 humidity 70 720 > th dose independent rect. 18 9
37 271.22 wind 7 14400 < th dose independent rect. 21 14
40 271.33 wind 7 14400 > th dose independent rect. 21 14
43 271.37 wind 7 14400 > th dose independent rect. 23 12
46 271.51 temperature 10 90 > th dose dependent rect. 8 17
48 271.53 wind 7 14400 < th dose independent rect. 7 3
50 271.57 humidity 90 30 < th dose independent rect. 8 11
55 271.60 wind 3 1440 < th dose dependent rect. 5 1
56 271.61 radiation 20 1440 < th dose dependent rect. 18 4
59 271.63 radiation 10 1440 > th dose independent rect. 17 13
62 271.68 wind 7 14400 > th dose independent rect. 7 3
65 271.76 wind 9 14400 < th dose independent rect. 21 7
71 271.81 radiation 20 1440 < th dose dependent rect. 18 6
75 271.88 radiation 10 1440 > th dose independent rect. 17 1
89 271.92 humidity 70 1440 < th dose independent rect. 17 18
93 272.02 humidity 70 720 < th dose independent rect. 17 2
112 272.11 radiation 10 270 < th dose independent rect. 4 13
113 272.12 humidity 70 720 > th dose independent rect. 19 1
115 272.14 humidity 70 1440 < th dose independent rect. 10 1
118 272.16 wind 5 14400 > th dose dependent rect. 23 13
119 272.16 radiation 20 270 < th dose dependent rect. 4 13
128 272.26 humidity 50 4320 > th dose independent rect. 3 7
129 272.28 temperature 15 30 > th dose independent rect. 19 13
131 272.29 humidity 50 1440 < th dose independent rect. 12 5
169 272.48 humidity 50 1440 < th dose independent rect. 15 2
172 272.49 humidity 50 1440 < th dose independent rect. 15 23
176 272.55 radiation 10 10 < th dose independent rect. 12 14
192 272.64 temperature 10 30 > th dose dependent rect. 8 7
195 272.66 wind 9 14400 > th dose dependent rect. 21 1
196 272.66 wind 5 14400 > th dose dependent rect. 8 3
200 272.68 wind 9 14400 > th dose independent rect. 21 1
205 272.70 temperature 20 30 > th dose independent rect. 8 7
209 272.71 humidity 50 4320 > th dose independent rect. 20 14
210 272.72 humidity 70 1440 > th dose independent rect. 10 1
264 272.85 wind 9 14400 < th dose independent rect. 21 1
267 272.85 wind 9 14400 > th dose dependent rect. 21 5
269 272.86 humidity 50 1440 < th dose independent sin 19 NA
289 272.86 humidity 50 1440 > th dose independent rect. 16 22
292 272.86 humidity 60 1440 < th dose dependent rect. 17 1
294 272.87 humidity 50 30 > th dose independent rect. 8 11
297 272.88 humidity 50 1440 < th dose independent no NA NA
436 272.89 temperature 30 720 < th dose independent rect. 18 9
444 272.90 wind 9 14400 > th dose dependent rect. 15 7
449 272.91 temperature 30 270 < th dose dependent rect. 1 19
451 272.92 wind 9 14400 > th dose independent rect. 21 7
468 272.93 radiation 20 1440 < th dose dependent rect. 18 1
471 272.94 humidity 50 1440 < th dose dependent rect. 15 2
478 272.95 humidity 90 30 < th dose independent rect. 8 7
511 272.99 wind 9 14400 > th dose independent rect. 21 5
513 273.00 wind 5 14400 < th dose independent rect. 22 1
550 273.06 humidity 50 1440 < th dose dependent rect. 16 22
552 273.07 atmosphere 995 30 > th dose independent rect. 8 11
563 273.10 wind 5 14400 < th dose independent rect. 1 1
570 273.10 radiation 20 270 < th dose dependent sin 3 NA
582 273.13 radiation 20 270 < th dose dependent rect. 22 22
585 273.14 wind 9 14400 > th dose dependent rect. 15 14
590 273.15 temperature 30 1440 > th dose dependent rect. 18 1
600 273.15 wind 9 14400 > th dose dependent rect. 15 11
606 273.16 wind 5 14400 > th dose independent rect. 1 1
611 273.17 humidity 50 1440 > th dose independent rect. 13 4
629 273.20 wind 9 30 < th dose independent rect. 8 11
660 273.30 temperature 30 720 < th dose independent rect. 17 14
661 273.30 humidity 50 1440 > th dose independent rect. 13 20
681 273.32 wind 1 30 > th dose independent rect. 8 11
686 273.33 wind 7 14400 > th dose dependent rect. 23 4
693 273.35 humidity 50 1440 > th dose independent rect. 3 14
696 273.37 humidity 50 1440 > th dose independent rect. 13 11
716 273.41 wind 1 90 > th dose independent rect. 1 7
723 273.42 wind 1 1440 > th dose independent rect. 4 2
726 273.42 humidity 50 1440 > th dose independent rect. 20 21
728 273.42 wind 5 14400 > th dose dependent sin 7 NA
742 273.45 temperature 30 720 < th dose independent rect. 19 17
771 273.47 humidity 50 1440 > th dose independent rect. 3 21
785 273.48 wind 5 14400 > th dose dependent rect. 1 1
793 273.49 wind 1 43200 < th dose dependent rect. 24 13
799 273.50 atmosphere 1010 10 < th dose independent rect. 23 16
825 273.52 wind 7 14400 < th dose independent sin 7 NA
826 273.52 humidity 50 1440 > th dose independent sin 16 NA
848 273.54 wind 1 43200 < th dose independent rect. 21 15
892 273.56 wind 1 43200 < th dose independent rect. 23 13
898 273.57 wind 9 1440 < th dose independent rect. 3 3
899 273.57 temperature 10 1440 > th dose independent rect. 3 3
902 273.57 temperature 30 1440 < th dose independent rect. 3 3
906 273.57 humidity 50 1440 > th dose independent rect. 3 3
915 273.57 atmosphere 995 1440 > th dose independent rect. 3 3
916 273.57 radiation 20 1440 < th dose independent rect. 3 3
933 273.57 temperature 10 1440 > th dose independent rect. 6 21
946 273.58 humidity 50 1440 > th dose independent rect. 7 17
956 273.59 temperature 15 720 > th dose dependent rect. 7 2
958 273.60 humidity 50 1440 < th dose independent sin 9 NA
961 273.60 wind 7 14400 < th dose independent rect. 23 4
977 273.61 radiation 10 270 < th dose independent sin 1 NA
978 273.61 wind 1 1440 < th dose independent rect. 4 2
979 273.61 temperature 30 720 < th dose independent rect. 17 5
997 273.62 atmosphere 1015 30 < th dose independent rect. 8 11
999 273.62 temperature 30 30 < th dose independent rect. 19 13
1000 273.62 humidity 50 30 > th dose independent rect. 19 13