Os11g0170100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 6-aminohexanoate-cyclic-dimer hydrolase (EC 3.5.2.12).
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Os11g0170100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 6-aminohexanoate-cyclic-dimer hydrolase (EC 3.5.2.12).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 281.02 | 0.788 | 5.35 | -2.42 | 1.23 | -1.63 | 1.07 | -0.675 | 0.0444 | 1.16 | 1014 | 5957 | -- | -- |
| 282.7 | 0.783 | 5.37 | -2.49 | 1.24 | -1.58 | 0.992 | -- | 0.0409 | 1.16 | 1014 | 5909 | -- | -- |
| 285.79 | 0.787 | 5.35 | -2.45 | 1.22 | -1.62 | -- | -0.649 | 0.0453 | 1.17 | 1014 | 5949 | -- | -- |
| 287.24 | 0.789 | 5.37 | -2.55 | 1.22 | -1.57 | -- | -- | 0.0199 | 1.19 | 1014 | 5915 | -- | -- |
| 378.58 | 0.906 | 5.34 | -2.41 | -- | -1.66 | -- | -0.618 | 0.0581 | -- | 1014 | 5863 | -- | -- |
| 355.01 | 0.883 | 5.3 | -2.07 | 1.23 | -- | 1.04 | -- | 0.319 | 1.23 | -- | -- | -- | -- |
| 359.42 | 0.888 | 5.3 | -2.1 | 1.23 | -- | -- | -- | 0.313 | 1.27 | -- | -- | -- | -- |
| 379.71 | 0.908 | 5.35 | -2.53 | -- | -1.66 | -- | -- | 0.0319 | -- | 1014 | 5716 | -- | -- |
| 419.85 | 0.954 | 5.3 | -- | 1.18 | -1.34 | -- | -- | 0.36 | 1.2 | 1014 | 4506 | -- | -- |
| 453.54 | 0.995 | 5.28 | -2.05 | -- | -- | -- | -- | 0.338 | -- | -- | -- | -- | -- |
| 475.9 | 1.02 | 5.25 | -- | 1.2 | -- | -- | -- | 0.547 | 1.21 | -- | -- | -- | -- |
| 505.84 | 1.05 | 5.27 | -- | -- | -1.42 | -- | -- | 0.391 | -- | 1014 | 4248 | -- | -- |
| 564.85 | 1.11 | 5.23 | -- | -- | -- | -- | -- | 0.566 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 280.82 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 2 | 281.06 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 4 | 281.25 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 8 | 7 |
| 30 | 281.95 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 58 | 282.11 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 92 | 282.31 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 133 | 282.53 | humidity | 50.0 | 14400 | < th | dose dependent | no | NA | NA |
| 296 | 282.86 | humidity | 50.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 298 | 282.87 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 316 | 282.92 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 317 | 282.97 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 359 | 283.29 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 21 | 17 |
| 361 | 283.30 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 365 | 283.31 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 366 | 283.31 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 369 | 283.35 | humidity | 50.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 380 | 283.57 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 389 | 283.63 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 410 | 283.73 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 415 | 283.79 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 416 | 283.79 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 427 | 284.06 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 433 | 284.15 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 455 | 284.39 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 470 | 284.58 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 493 | 284.77 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 556 | 285.24 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 589 | 285.66 | atmosphere | 1015.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 595 | 285.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 601 | 285.79 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 631 | 285.94 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 633 | 285.94 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 659 | 286.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 681 | 286.22 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 684 | 286.23 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 716 | 286.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 796 | 286.80 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 804 | 286.82 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 9 | 18 |
| 901 | 287.00 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 10 | 18 |
| 903 | 287.00 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 19 | 21 |
| 911 | 287.01 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 8 | 17 |
| 948 | 287.04 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 11 | 1 |