Os11g0169800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 4) (LACS 4).
FiT-DB / Search/ Help/ Sample detail
|
Os11g0169800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 4) (LACS 4).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 184.94 | 0.639 | 3.57 | -0.304 | 0.0593 | 0.563 | -1.14 | 3.04 | 0.0331 | 17.4 | 30.2 | 723 | -- | -- |
| 185.28 | 0.634 | 3.61 | -0.594 | 0.0728 | 0.884 | -1.11 | -- | 0.0337 | 17.1 | 30.32 | 723 | -- | -- |
| 187.55 | 0.638 | 3.58 | -0.402 | 0.138 | 0.573 | -- | 1.83 | 0.0296 | 16.1 | 30.3 | 815 | -- | -- |
| 187.61 | 0.638 | 3.61 | -0.61 | 0.147 | 0.791 | -- | -- | 0.0363 | 15.9 | 30.3 | 827 | -- | -- |
| 188.16 | 0.639 | 3.59 | -0.409 | -- | 0.646 | -- | 1.9 | 0.0252 | -- | 30.28 | 755 | -- | -- |
| 203.93 | 0.669 | 3.63 | -0.466 | 0.254 | -- | -0.669 | -- | -0.0635 | 17.5 | -- | -- | -- | -- |
| 204.93 | 0.67 | 3.63 | -0.465 | 0.254 | -- | -- | -- | -0.0668 | 18.1 | -- | -- | -- | -- |
| 188.32 | 0.639 | 3.61 | -0.611 | -- | 0.848 | -- | -- | 0.026 | -- | 30.31 | 755 | -- | -- |
| 197.09 | 0.654 | 3.6 | -- | 0.135 | 0.724 | -- | -- | 0.0781 | 15.9 | 30.4 | 768 | -- | -- |
| 208.28 | 0.674 | 3.63 | -0.472 | -- | -- | -- | -- | -0.0725 | -- | -- | -- | -- | -- |
| 210.64 | 0.679 | 3.62 | -- | 0.261 | -- | -- | -- | -0.015 | 18 | -- | -- | -- | -- |
| 197.87 | 0.655 | 3.6 | -- | -- | 0.77 | -- | -- | 0.0773 | -- | 30.4 | 722 | -- | -- |
| 214.17 | 0.683 | 3.62 | -- | -- | -- | -- | -- | -0.0201 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.59 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 6 | 183.69 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 16 |
| 8 | 183.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 9 | 183.79 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 21 |
| 13 | 183.96 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 17 |
| 16 | 184.05 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 23 |
| 18 | 184.14 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 21 |
| 19 | 184.21 | temperature | 30 | 720 | < th | dose independent | rect. | 6 | 16 |
| 28 | 184.48 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 23 |
| 33 | 184.55 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 17 |
| 41 | 184.70 | temperature | 30 | 720 | > th | dose independent | rect. | 14 | 21 |
| 45 | 184.75 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 8 |
| 47 | 184.76 | temperature | 30 | 720 | > th | dose independent | rect. | 14 | 23 |
| 49 | 184.78 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 64 | 184.95 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 22 |
| 70 | 185.04 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 12 |
| 75 | 185.09 | temperature | 30 | 720 | > th | dose independent | rect. | 12 | 23 |
| 77 | 185.12 | temperature | 30 | 720 | > th | dose independent | no | NA | NA |
| 78 | 185.12 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 11 |
| 171 | 185.12 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 174 | 185.15 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 12 |
| 192 | 185.17 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 195 | 185.19 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 23 |
| 200 | 185.21 | temperature | 30 | 720 | < th | dose independent | no | NA | NA |
| 203 | 185.22 | temperature | 30 | 720 | > th | dose independent | sin | 21 | NA |
| 223 | 185.23 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 23 |
| 237 | 185.35 | temperature | 30 | 720 | < th | dose independent | rect. | 19 | 23 |
| 238 | 185.36 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 254 | 185.43 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 14 |
| 273 | 185.47 | temperature | 30 | 720 | < th | dose independent | sin | 1 | NA |
| 276 | 185.51 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 285 | 185.57 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 16 |
| 325 | 185.77 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 352 | 185.99 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 356 | 186.04 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 399 | 186.17 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 405 | 186.19 | temperature | 30 | 720 | > th | dose independent | rect. | 14 | 4 |
| 406 | 186.19 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 427 | 186.24 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 8 | 15 |
| 444 | 186.34 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 8 |
| 446 | 186.35 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 460 | 186.37 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 488 | 186.37 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 522 | 186.41 | temperature | 30 | 720 | < th | dose independent | sin | 17 | NA |
| 528 | 186.42 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 550 | 186.48 | temperature | 30 | 720 | > th | dose independent | sin | 10 | NA |
| 553 | 186.50 | temperature | 30 | 720 | < th | dose independent | sin | 21 | NA |
| 557 | 186.51 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 561 | 186.52 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 569 | 186.52 | temperature | 30 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 572 | 186.54 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 602 | 186.64 | temperature | 30 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 605 | 186.65 | temperature | 30 | 720 | > th | dose dependent | no | NA | NA |
| 606 | 186.65 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 11 |
| 692 | 186.65 | temperature | 30 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 752 | 186.69 | temperature | 30 | 720 | > th | dose dependent | sin | 22 | NA |
| 842 | 186.86 | humidity | 90 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 848 | 186.88 | humidity | 70 | 14400 | < th | dose dependent | sin | 12 | NA |
| 853 | 186.91 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 6 |
| 856 | 186.92 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 862 | 186.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 870 | 186.96 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 933 | 187.05 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 966 | 187.08 | radiation | 30 | 720 | > th | dose independent | rect. | 15 | 18 |
| 971 | 187.09 | temperature | 30 | 720 | < th | dose independent | rect. | 12 | 8 |
| 972 | 187.10 | temperature | 30 | 720 | < th | dose independent | sin | 10 | NA |