Os11g0167800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Anth (Pollen-specific desiccation-associated LLA23 protein).
FiT-DB / Search/ Help/ Sample detail
|
Os11g0167800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Anth (Pollen-specific desiccation-associated LLA23 protein).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.78 | 0.392 | 15.7 | -0.198 | 1.17 | 0.905 | 0.703 | 2.07 | -1.24 | 18.1 | 9 | 4576 | -- | -- |
| 72.77 | 0.397 | 15.6 | -0.291 | 1.18 | 0.77 | 0.934 | -- | -1.27 | 18.1 | 9.1 | 4620 | -- | -- |
| 70.86 | 0.392 | 15.6 | -0.202 | 1.17 | 0.902 | -- | 2.09 | -1.24 | 18 | 9 | 4601 | -- | -- |
| 72.89 | 0.398 | 15.6 | -0.36 | 1.19 | 0.581 | -- | -- | -1.2 | 17.9 | 9.1 | 4602 | -- | -- |
| 139.31 | 0.55 | 15.6 | -0.179 | -- | 1.04 | -- | 2.13 | -1.32 | -- | 9 | 4740 | -- | -- |
| 80.25 | 0.42 | 15.6 | -0.512 | 1.21 | -- | 0.659 | -- | -1.13 | 17.7 | -- | -- | -- | -- |
| 81.28 | 0.422 | 15.6 | -0.516 | 1.21 | -- | -- | -- | -1.13 | 17.6 | -- | -- | -- | -- |
| 143.13 | 0.557 | 15.6 | -0.314 | -- | 0.723 | -- | -- | -1.21 | -- | 9.2 | 4740 | -- | -- |
| 75.52 | 0.405 | 15.6 | -- | 1.2 | 0.671 | -- | -- | -1.17 | 17.9 | 9 | 4604 | -- | -- |
| 157.37 | 0.586 | 15.6 | -0.554 | -- | -- | -- | -- | -1.16 | -- | -- | -- | -- | -- |
| 88.29 | 0.44 | 15.6 | -- | 1.22 | -- | -- | -- | -1.07 | 17.6 | -- | -- | -- | -- |
| 145.49 | 0.562 | 15.6 | -- | -- | 0.824 | -- | -- | -1.21 | -- | 9.188 | 4749 | -- | -- |
| 165.47 | 0.6 | 15.5 | -- | -- | -- | -- | -- | -1.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 4 | 68.03 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 13 |
| 25 | 69.20 | temperature | 25 | 270 | > th | dose independent | sin | 14 | NA |
| 39 | 69.55 | wind | 9 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 42 | 69.58 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 2 |
| 44 | 69.63 | temperature | 25 | 270 | < th | dose independent | sin | 14 | NA |
| 63 | 70.01 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 16 |
| 73 | 70.16 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 78 | 70.20 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 81 | 70.21 | temperature | 25 | 10 | > th | dose independent | rect. | 20 | 10 |
| 135 | 70.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 137 | 70.77 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 151 | 70.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 152 | 70.88 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 157 | 70.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 187 | 71.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 218 | 71.37 | temperature | 25 | 10 | > th | dose independent | rect. | 18 | 12 |
| 246 | 71.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 266 | 71.61 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 22 |
| 274 | 71.65 | radiation | 1 | 720 | < th | dose dependent | rect. | 18 | 16 |
| 275 | 71.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 12 |
| 283 | 71.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 287 | 71.71 | wind | 9 | 4320 | > th | dose dependent | rect. | 20 | 20 |
| 328 | 71.85 | wind | 5 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 333 | 71.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 347 | 71.93 | wind | 5 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 356 | 71.95 | humidity | 80 | 720 | > th | dose independent | rect. | 19 | 2 |
| 368 | 71.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 373 | 72.00 | temperature | 30 | 10 | < th | dose independent | rect. | 7 | 23 |
| 375 | 72.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 376 | 72.01 | temperature | 25 | 10 | < th | dose independent | sin | 14 | NA |
| 378 | 72.01 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 381 | 72.02 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 390 | 72.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 392 | 72.07 | temperature | 10 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 395 | 72.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 396 | 72.09 | wind | 3 | 720 | > th | dose independent | rect. | 2 | 2 |
| 397 | 72.09 | wind | 9 | 4320 | > th | dose independent | rect. | 20 | 20 |
| 398 | 72.09 | temperature | 25 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 399 | 72.09 | wind | 9 | 4320 | > th | dose dependent | rect. | 13 | 8 |
| 410 | 72.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 420 | 72.14 | wind | 9 | 4320 | > th | dose dependent | rect. | 13 | 16 |
| 426 | 72.16 | wind | 9 | 4320 | > th | dose dependent | rect. | 13 | 11 |
| 449 | 72.20 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 458 | 72.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 468 | 72.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 505 | 72.31 | wind | 9 | 4320 | < th | dose independent | rect. | 20 | 20 |
| 528 | 72.35 | temperature | 15 | 30 | > th | dose dependent | rect. | 20 | 10 |
| 545 | 72.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 558 | 72.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 571 | 72.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 592 | 72.45 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 599 | 72.47 | radiation | 1 | 720 | < th | dose dependent | sin | 10 | NA |
| 630 | 72.53 | temperature | 25 | 10 | < th | dose independent | rect. | 14 | 12 |
| 635 | 72.54 | temperature | 30 | 270 | > th | dose independent | rect. | 12 | 1 |
| 646 | 72.56 | wind | 9 | 4320 | > th | dose dependent | rect. | 5 | 11 |
| 663 | 72.58 | wind | 9 | 4320 | > th | dose dependent | rect. | 23 | 17 |
| 664 | 72.59 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 8 |
| 676 | 72.61 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 16 |
| 692 | 72.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 693 | 72.63 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 722 | 72.65 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 740 | 72.67 | temperature | 30 | 270 | > th | dose independent | rect. | 16 | 22 |
| 747 | 72.68 | humidity | 90 | 720 | < th | dose independent | rect. | 6 | 1 |
| 759 | 72.69 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 1 |
| 762 | 72.69 | temperature | 20 | 10 | > th | dose dependent | sin | 1 | NA |
| 771 | 72.70 | temperature | 20 | 10 | > th | dose dependent | sin | 23 | NA |
| 789 | 72.72 | wind | 5 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 793 | 72.73 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 835 | 72.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 21 |
| 855 | 72.79 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 11 |
| 871 | 72.80 | humidity | 80 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 883 | 72.81 | wind | 9 | 4320 | > th | dose dependent | sin | 21 | NA |
| 894 | 72.82 | wind | 9 | 4320 | > th | dose independent | rect. | 5 | 11 |
| 901 | 72.83 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 8 |
| 902 | 72.83 | wind | 9 | 4320 | > th | dose independent | rect. | 7 | 9 |
| 915 | 72.84 | wind | 9 | 4320 | > th | dose independent | rect. | 23 | 17 |
| 951 | 72.87 | wind | 9 | 4320 | > th | dose dependent | rect. | 5 | 16 |
| 956 | 72.87 | wind | 9 | 4320 | > th | dose dependent | rect. | 23 | 22 |
| 958 | 72.88 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 970 | 72.89 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 985 | 72.90 | wind | 9 | 4320 | < th | dose independent | rect. | 6 | 10 |
| 987 | 72.90 | temperature | 20 | 30 | > th | dose independent | rect. | 6 | 11 |
| 988 | 72.90 | temperature | 25 | 10 | > th | dose independent | rect. | 15 | 15 |