FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0165700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Jacalin-related lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.08 (0.026) R2 : 0.0106
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.121 (0.0548) R2dN8 : 0.0136 R2N8 : 0.0106
σ : 0.49
deviance : 110.19
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.23 0.477 3.03 0.629 0.105 0.528 -0.281 -0.223 0.321 8.08 25.61 10119 -- --
102.9 0.472 3.03 0.756 0.0948 0.644 -0.317 -- 0.328 8.69 20.45 15903 -- --
103.37 0.474 3.03 0.652 0.102 0.558 -- -0.153 0.329 7.95 24.37 11076 -- --
102.76 0.472 3.04 0.77 0.101 0.655 -- -- 0.312 8.37 19.58 18943 -- --
103.93 0.475 3.03 0.646 -- 0.566 -- -0.123 0.329 -- 24.4 10937 -- --
107.92 0.487 3.07 0.243 0.103 -- -0.252 -- 0.146 8.5 -- -- -- --
108.12 0.487 3.07 0.235 0.104 -- -- -- 0.146 8.56 -- -- -- --
103.32 0.473 3.04 0.766 -- 0.642 -- -- 0.312 -- 19.62 19668 -- --
108.13 0.487 3.07 -- 0.149 0.37 -- -- 0.164 11.3 38.41 9862 -- --
108.73 0.487 3.08 0.235 -- -- -- -- 0.147 -- -- -- -- --
109.58 0.49 3.08 -- 0.104 -- -- -- 0.12 8.4 -- -- -- --
109.22 0.487 3.07 -- -- 0.204 -- -- 0.158 -- 45.43 6446 -- --
110.19 0.49 3.08 -- -- -- -- -- 0.121 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.31 wind 9 43200 > th dose independent rect. 2 2
2 101.37 radiation 1 30 > th dose dependent rect. 18 1
13 101.41 wind 9 10 > th dose independent rect. 18 1
16 101.41 wind 9 10 > th dose dependent rect. 18 1
30 101.55 wind 9 30 > th dose dependent rect. 18 8
75 101.64 wind 9 43200 > th dose dependent rect. 2 2
76 101.71 humidity 90 14400 < th dose independent rect. 14 10
88 101.80 humidity 90 14400 < th dose independent sin 17 NA
90 101.80 humidity 90 14400 < th dose independent rect. 16 3
100 101.82 wind 9 43200 > th dose independent rect. 24 6
104 101.83 radiation 20 4320 > th dose independent rect. 7 1
106 101.84 wind 9 43200 > th dose independent rect. 2 4
107 101.84 humidity 80 14400 > th dose dependent rect. 18 1
110 101.85 wind 9 43200 < th dose independent rect. 2 4
112 101.86 wind 9 43200 < th dose independent rect. 24 6
123 101.88 humidity 90 14400 > th dose independent rect. 14 11
135 101.91 humidity 90 14400 < th dose independent rect. 5 20
159 101.94 wind 9 43200 > th dose dependent rect. 24 4
190 101.97 wind 1 720 < th dose dependent rect. 15 5
199 101.99 humidity 90 14400 > th dose independent sin 17 NA
216 102.00 humidity 80 14400 > th dose dependent rect. 10 16
219 102.01 humidity 90 14400 < th dose independent rect. 7 23
220 102.01 humidity 80 14400 > th dose dependent rect. 11 14
233 102.03 humidity 90 14400 > th dose independent rect. 16 3
255 102.04 humidity 80 14400 > th dose dependent sin 17 NA
258 102.04 wind 9 43200 > th dose dependent rect. 24 6
282 102.05 wind 9 43200 > th dose independent rect. 4 2
283 102.05 wind 9 43200 < th dose independent rect. 4 2
291 102.05 radiation 10 4320 > th dose dependent rect. 7 1
306 102.05 humidity 80 14400 > th dose dependent rect. 14 11
324 102.06 humidity 90 14400 < th dose independent no NA NA
325 102.06 humidity 90 14400 < th dose independent rect. 21 3
331 102.06 humidity 90 14400 < th dose independent rect. 13 22
375 102.07 humidity 90 14400 < th dose independent rect. 21 23
404 102.08 humidity 70 14400 > th dose dependent rect. 15 1
433 102.10 humidity 80 14400 > th dose independent rect. 14 5
458 102.11 wind 7 43200 > th dose dependent rect. 2 4
466 102.12 wind 9 14400 > th dose independent rect. 5 5
482 102.12 humidity 80 14400 > th dose dependent rect. 11 9
487 102.13 humidity 80 14400 > th dose independent rect. 11 8
560 102.17 humidity 90 14400 < th dose independent rect. 5 14
634 102.20 temperature 25 14400 < th dose dependent rect. 17 1
666 102.21 humidity 80 14400 > th dose dependent rect. 21 23
717 102.24 radiation 1 14400 > th dose independent rect. 15 14
725 102.24 humidity 80 14400 > th dose dependent no NA NA
726 102.24 temperature 25 14400 < th dose dependent rect. 15 3
733 102.24 humidity 80 14400 > th dose dependent rect. 1 19
738 102.24 humidity 80 14400 > th dose dependent rect. 1 22
752 102.25 temperature 25 14400 < th dose dependent rect. 15 1
768 102.25 humidity 80 14400 > th dose dependent rect. 14 23
774 102.26 radiation 1 14400 > th dose independent rect. 15 3
788 102.26 wind 1 43200 < th dose dependent rect. 18 1
792 102.26 radiation 1 14400 < th dose dependent rect. 15 3
843 102.28 radiation 1 14400 < th dose independent rect. 15 3
877 102.28 humidity 80 14400 > th dose dependent rect. 4 16
933 102.30 radiation 1 14400 < th dose independent rect. 15 15
985 102.32 radiation 1 14400 > th dose independent sin 15 NA