Os11g0162300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0162300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.6 | 0.338 | 3.16 | -0.0628 | 0.069 | -0.343 | 0.121 | 1.29 | 0.188 | 10 | 1.003 | 16 | -- | -- |
| 52.6 | 0.34 | 3.14 | -0.0106 | 0.0711 | -0.247 | 0.203 | -- | 0.204 | 10.8 | 1.004 | 16 | -- | -- |
| 51.65 | 0.335 | 3.16 | -0.0579 | 0.0718 | -0.334 | -- | 1.3 | 0.188 | 9.22 | 1 | 16 | -- | -- |
| 52.69 | 0.34 | 3.14 | -0.00144 | 0.0821 | -0.227 | -- | -- | 0.203 | 8.8 | 1 | 16 | -- | -- |
| 51.94 | 0.336 | 3.16 | -0.0607 | -- | -0.345 | -- | 1.33 | 0.187 | -- | 1.001 | 16 | -- | -- |
| 54.28 | 0.345 | 3.14 | 0.0242 | 0.124 | -- | -0.125 | -- | 0.198 | 6.24 | -- | -- | -- | -- |
| 54.3 | 0.345 | 3.14 | 0.0233 | 0.124 | -- | -- | -- | 0.199 | 6.73 | -- | -- | -- | -- |
| 53.07 | 0.341 | 3.14 | -0.00259 | -- | -0.237 | -- | -- | 0.204 | -- | 1.001 | 16 | -- | -- |
| 52.69 | 0.34 | 3.14 | -- | 0.0821 | -0.227 | -- | -- | 0.203 | 8.8 | 1 | 16 | -- | -- |
| 55.1 | 0.347 | 3.14 | 0.0261 | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
| 54.31 | 0.345 | 3.14 | -- | 0.124 | -- | -- | -- | 0.197 | 6.72 | -- | -- | -- | -- |
| 53.07 | 0.34 | 3.14 | -- | -- | -0.237 | -- | -- | 0.204 | -- | 1.001 | 16 | -- | -- |
| 55.12 | 0.347 | 3.14 | -- | -- | -- | -- | -- | 0.199 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.71 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 42.76 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 6 | 42.92 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 7 | 42.92 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 8 | 42.93 | wind | 5.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 11 | 42.95 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 13 | 42.95 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 16 | 42.96 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 28 | 42.98 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 30 | 42.98 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 31 | 42.98 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 34 | 42.98 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 35 | 42.98 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 37 | 42.98 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 42 | 42.98 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 43 | 42.98 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 49 | 42.98 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 54 | 42.98 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 55 | 42.99 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 87 | 43.07 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 88 | 43.11 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 89 | 43.13 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 93 | 43.14 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 108 | 44.13 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 114 | 44.93 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 115 | 44.93 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 130 | 46.16 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 136 | 46.29 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 137 | 46.29 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 140 | 46.29 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 144 | 46.29 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 153 | 46.29 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 154 | 46.29 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 174 | 46.29 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 177 | 46.29 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 191 | 46.67 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 213 | 47.67 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 265 | 48.37 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 268 | 48.39 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 286 | 48.91 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 288 | 48.96 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 16 |
| 290 | 48.98 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 5 |
| 296 | 49.05 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 323 | 49.20 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 331 | 49.27 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 13 |
| 332 | 49.27 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 334 | 49.28 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 10 |
| 345 | 49.36 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 369 | 49.56 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 373 | 49.58 | radiation | 30.0 | 30 | < th | dose independent | rect. | 3 | 8 |
| 385 | 49.60 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 23 | 9 |
| 416 | 49.71 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 428 | 49.74 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 431 | 49.74 | wind | 3.0 | 10 | < th | dose dependent | rect. | 22 | 5 |
| 432 | 49.74 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 434 | 49.76 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 560 | 49.78 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 18 | 14 |
| 604 | 49.82 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 618 | 49.82 | humidity | 70.0 | 30 | < th | dose independent | rect. | 18 | 14 |
| 639 | 49.83 | radiation | 30.0 | 10 | > th | dose independent | rect. | 15 | 17 |
| 917 | 50.03 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 918 | 50.03 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 941 | 50.07 | radiation | 30.0 | 30 | < th | dose independent | sin | 11 | NA |
| 982 | 50.11 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 7 |