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Os11g0161100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0162) R2 : 0.16
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.318 (0.0341) R2dN8 : 0.207 R2N8 : 0.16
σ : 0.305
deviance : 42.69
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.56 0.233 10.8 0.472 0.4 -0.273 0.000543 -1.42 0.37 6.5 15.12 73 -- --
27.84 0.246 10.8 0.43 0.396 -0.16 0.00725 -- 0.364 6.2 8.784 97 -- --
24.56 0.231 10.8 0.473 0.401 -0.272 -- -1.43 0.37 6.49 15.32 70 -- --
27.83 0.246 10.8 0.438 0.398 -0.173 -- -- 0.366 6.36 6.532 97 -- --
30.31 0.256 10.8 0.445 -- -0.414 -- -0.664 0.393 -- -27.74 531 -- --
28.15 0.249 10.8 0.436 0.414 -- 0.253 -- 0.359 5.32 -- -- -- --
28.26 0.249 10.8 0.437 0.418 -- -- -- 0.358 5.57 -- -- -- --
30.78 0.258 10.8 0.469 -- -0.432 -- -- 0.405 -- -21.16 609 -- --
32.91 0.267 10.8 -- 0.408 -0.161 -- -- 0.318 6.11 14.15 97 -- --
37.33 0.285 10.8 0.451 -- -- -- -- 0.368 -- -- -- -- --
33.29 0.27 10.8 -- 0.425 -- -- -- 0.309 5.52 -- -- -- --
36.56 0.282 10.8 -- -- -0.417 -- -- 0.352 -- -12.01 608 -- --
42.69 0.305 10.8 -- -- -- -- -- 0.318 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.17 temperature 30.0 720 < th dose dependent rect. 17 2
4 23.28 temperature 15.0 720 > th dose dependent rect. 20 1
10 23.44 radiation 30.0 720 < th dose dependent rect. 16 8
17 23.52 temperature 15.0 270 > th dose dependent rect. 20 10
19 23.54 temperature 15.0 720 > th dose independent rect. 13 8
20 23.55 temperature 25.0 720 < th dose independent rect. 14 10
33 23.64 temperature 15.0 270 > th dose independent rect. 20 17
40 23.67 radiation 1.0 720 < th dose independent rect. 15 4
45 23.70 temperature 15.0 30 > th dose dependent rect. 20 11
77 23.82 radiation 1.0 720 < th dose independent rect. 15 9
90 23.88 radiation 1.0 720 < th dose dependent rect. 15 4
96 23.92 temperature 15.0 720 > th dose independent rect. 9 16
108 23.95 temperature 10.0 720 > th dose dependent rect. 15 8
129 24.02 temperature 15.0 10 > th dose independent rect. 23 15
139 24.03 temperature 30.0 10 < th dose independent rect. 24 16
143 24.03 temperature 30.0 270 < th dose dependent rect. 16 15
144 24.04 temperature 20.0 720 < th dose independent rect. 4 1
147 24.05 radiation 40.0 90 < th dose independent sin 6 NA
165 24.08 precipitation 0.1 1440 < th dose independent rect. 12 1
169 24.08 precipitation 0.1 1440 < th dose dependent rect. 12 1
180 24.09 temperature 10.0 720 > th dose dependent rect. 15 10
182 24.09 temperature 25.0 90 < th dose dependent rect. 17 12
206 24.13 temperature 20.0 90 > th dose dependent rect. 7 8
212 24.13 temperature 25.0 10 < th dose dependent rect. 17 13
214 24.14 radiation 1.0 720 < th dose dependent rect. 16 1
218 24.15 temperature 25.0 720 < th dose independent sin 17 NA
224 24.15 temperature 15.0 90 > th dose dependent rect. 23 8
266 24.20 temperature 25.0 270 < th dose independent rect. 7 7
274 24.21 temperature 15.0 10 > th dose independent rect. 20 20
293 24.23 radiation 20.0 720 < th dose independent rect. 15 9
330 24.26 radiation 1.0 720 < th dose independent sin 17 NA
349 24.27 temperature 25.0 30 < th dose dependent sin 13 NA
382 24.30 radiation 20.0 720 < th dose dependent rect. 15 4
404 24.33 temperature 30.0 270 < th dose independent rect. 23 16
407 24.33 temperature 15.0 10 > th dose independent rect. 20 22
408 24.33 radiation 40.0 90 < th dose independent rect. 11 23
417 24.34 temperature 30.0 10 < th dose independent rect. 11 7
420 24.34 radiation 10.0 90 > th dose dependent sin 4 NA
432 24.35 temperature 15.0 720 > th dose independent rect. 19 6
438 24.35 radiation 1.0 90 > th dose dependent rect. 7 7
444 24.36 temperature 30.0 10 < th dose independent rect. 11 5
452 24.36 temperature 20.0 10 > th dose dependent rect. 7 9
459 24.36 radiation 10.0 90 > th dose dependent rect. 15 23
508 24.39 atmosphere 1015.0 1440 < th dose independent rect. 1 8
511 24.39 temperature 15.0 30 > th dose independent rect. 23 13
534 24.40 temperature 15.0 1440 > th dose independent rect. 12 1
539 24.40 temperature 25.0 30 > th dose dependent sin 3 NA
555 24.41 radiation 1.0 720 < th dose dependent sin 18 NA
585 24.43 temperature 25.0 720 > th dose independent rect. 14 11
616 24.45 temperature 25.0 720 > th dose independent rect. 20 1
619 24.45 temperature 15.0 270 > th dose independent rect. 20 10
623 24.45 radiation 40.0 30 < th dose independent rect. 16 19
625 24.45 radiation 40.0 270 < th dose independent rect. 9 22
630 24.45 radiation 1.0 270 > th dose dependent sin 8 NA
771 24.50 temperature 15.0 720 > th dose independent sin 22 NA
780 24.50 humidity 50.0 720 > th dose dependent rect. 16 8
813 24.51 temperature 15.0 10 > th dose independent sin 7 NA
836 24.51 temperature 15.0 270 > th dose independent sin 18 NA
847 24.51 temperature 15.0 10 > th dose independent sin 1 NA
864 24.51 temperature 10.0 10 > th dose dependent sin 11 NA
895 24.52 temperature 15.0 10 > th dose dependent rect. 7 13
923 24.53 radiation 30.0 90 > th dose dependent rect. 11 23