Os11g0160600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0160600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.46 | 0.383 | 8.24 | -1.01 | 0.655 | 0.444 | 0.0861 | 2.48 | -0.848 | 21.2 | 1003 | 11 | -- | -- |
| 66.9 | 0.384 | 8.25 | -1.1 | 0.659 | 0.854 | 0.066 | -- | -0.842 | 21.3 | 1003 | 31 | -- | -- |
| 66.46 | 0.383 | 8.24 | -1.01 | 0.655 | 0.455 | -- | 2.42 | -0.848 | 21.2 | 1003 | 11 | -- | -- |
| 66.9 | 0.383 | 8.25 | -1.11 | 0.659 | 0.857 | -- | -- | -0.842 | 21.3 | 1003 | 6 | -- | -- |
| 91.35 | 0.448 | 8.21 | -0.975 | -- | 0.3 | -- | 3.3 | -0.854 | -- | 1003 | 11 | -- | -- |
| 76.21 | 0.409 | 8.26 | -1.02 | 0.658 | -- | 0.0832 | -- | -0.887 | 21.2 | -- | -- | -- | -- |
| 76.23 | 0.409 | 8.26 | -1.02 | 0.657 | -- | -- | -- | -0.887 | 21.2 | -- | -- | -- | -- |
| 92.14 | 0.447 | 8.24 | -1.1 | -- | 0.851 | -- | -- | -0.847 | -- | 1003 | 7 | -- | -- |
| 98.36 | 0.462 | 8.22 | -- | 0.641 | 0.569 | -- | -- | -0.698 | 21.1 | 1006 | 9 | -- | -- |
| 101.24 | 0.47 | 8.25 | -1.02 | -- | -- | -- | -- | -0.89 | -- | -- | -- | -- | -- |
| 103.61 | 0.476 | 8.24 | -- | 0.658 | -- | -- | -- | -0.773 | 21 | -- | -- | -- | -- |
| 121.26 | 0.513 | 8.19 | -- | -- | 0.623 | -- | -- | -0.642 | -- | 1008 | 555 | -- | -- |
| 128.54 | 0.529 | 8.22 | -- | -- | -- | -- | -- | -0.777 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.61 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 8 | 23 |
| 2 | 63.47 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 4 | 64.53 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 7 | 65.24 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 8 | 65.24 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 9 | 65.26 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 14 | 65.56 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 20 |
| 16 | 65.60 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 21 | 65.78 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 26 | 65.93 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 2 | 4 |
| 27 | 65.94 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 30 | 66.04 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 31 | 66.19 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 34 | 66.33 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 1 | 6 |
| 35 | 66.40 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 42 | 66.53 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 44 | 66.55 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 46 | 66.56 | wind | 7.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 54 | 66.67 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 19 |
| 67 | 66.79 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 75 | 66.87 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 1 | 10 |
| 76 | 66.87 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 78 | 66.88 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 19 | 16 |
| 84 | 66.89 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 3 | 8 |
| 85 | 66.89 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 21 | 14 |
| 96 | 66.94 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 103 | 66.97 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 123 | 67.02 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 18 | 22 |
| 130 | 67.07 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 18 | 19 |
| 132 | 67.07 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 134 | 67.08 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 161 | 67.11 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 171 | 67.13 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 172 | 67.13 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 173 | 67.13 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 18 | 23 |
| 186 | 67.16 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 19 | 16 |
| 187 | 67.16 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 188 | 67.16 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 193 | 67.17 | atmosphere | 1005.0 | 10 | < th | dose dependent | no | NA | NA |
| 198 | 67.17 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 202 | 67.18 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 207 | 67.19 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 208 | 67.19 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 213 | 67.20 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 234 | 67.23 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 236 | 67.23 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 241 | 67.23 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 249 | 67.25 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 251 | 67.26 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 13 |
| 266 | 67.27 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 283 | 67.30 | atmosphere | 1005.0 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 316 | 67.33 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 17 | 22 |
| 337 | 67.37 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 359 | 67.38 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 360 | 67.38 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 365 | 67.39 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 366 | 67.39 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 370 | 67.40 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 371 | 67.40 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 377 | 67.41 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 394 | 67.42 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 396 | 67.43 | atmosphere | 1000.0 | 10 | > th | dose independent | no | NA | NA |
| 398 | 67.43 | atmosphere | 1000.0 | 10 | < th | dose independent | no | NA | NA |
| 426 | 67.45 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 435 | 67.46 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 436 | 67.46 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 11 | 23 |
| 447 | 67.47 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 463 | 67.48 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 15 | 23 |
| 470 | 67.49 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 478 | 67.50 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 485 | 67.51 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 499 | 67.52 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 8 | NA |
| 519 | 67.55 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 22 |
| 530 | 67.56 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 553 | 67.57 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 603 | 67.63 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 643 | 67.65 | atmosphere | 1005.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 722 | 67.71 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 730 | 67.72 | temperature | 30.0 | 4320 | > th | dose independent | sin | 9 | NA |
| 742 | 67.73 | temperature | 30.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 757 | 67.73 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 857 | 67.79 | wind | 9.0 | 720 | < th | dose independent | rect. | 7 | 18 |
| 870 | 67.80 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 871 | 67.80 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 917 | 67.84 | radiation | 1.0 | 30 | > th | dose independent | rect. | 7 | 11 |
| 930 | 67.84 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 980 | 67.87 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 985 | 67.87 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 23 |
| 994 | 67.87 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 995 | 67.88 | temperature | 25.0 | 270 | > th | dose independent | sin | 13 | NA |