FiT-DB / Search/ Help/ Sample detail

Os11g0160500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BZIP-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.1 (0.0139) R2 : 0.0254
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.101 (0.0293) R2dN8 : 0.0328 R2N8 : 0.0254
σ : 0.262
deviance : 31.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.06 0.221 12.1 0.426 0.229 -0.183 0.542 -0.213 0.148 18.6 80 97 -- --
22.28 0.22 12.1 0.431 0.215 -0.172 0.544 -- 0.148 19.1 80 100 -- --
22.7 0.224 12.1 0.429 0.222 -0.194 -- -0.196 0.154 17.8 80 97 -- --
22.87 0.223 12.1 0.429 0.248 -0.208 -- -- 0.153 18 79.96 94 -- --
24.78 0.233 12.1 0.419 -- -0.129 -- -0.205 0.148 -- 79.09 70 -- --
23.85 0.229 12.1 0.438 0.193 -- 0.518 -- 0.149 21.4 -- -- -- --
24.82 0.233 12.1 0.418 0.19 -- -- -- 0.148 21.7 -- -- -- --
25.06 0.234 12.1 0.426 -- -0.129 -- -- 0.15 -- 79.09 70 -- --
27.64 0.245 12.1 -- 0.238 -0.2 -- -- 0.104 18.2 80 109 -- --
26.96 0.243 12.1 0.42 -- -- -- -- 0.148 -- -- -- -- --
29.43 0.254 12.1 -- 0.191 -- -- -- 0.101 21.9 -- -- -- --
29.84 0.255 12.1 -- -- -0.125 -- -- 0.103 -- 79.09 70 -- --
31.62 0.262 12.1 -- -- -- -- -- 0.101 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.23 humidity 80 90 < th dose independent rect. 18 20
11 21.47 humidity 80 90 > th dose independent rect. 3 18
13 21.54 temperature 10 720 > th dose dependent rect. 20 11
15 21.55 temperature 20 270 > th dose independent rect. 11 21
16 21.55 humidity 80 90 > th dose independent rect. 23 22
28 21.63 temperature 30 720 < th dose dependent rect. 23 4
37 21.68 temperature 20 270 > th dose independent rect. 3 14
44 21.69 radiation 40 90 < th dose dependent rect. 4 13
62 21.77 humidity 80 90 > th dose independent rect. 13 22
71 21.80 humidity 80 90 < th dose independent rect. 22 15
76 21.80 humidity 70 90 > th dose dependent rect. 23 22
77 21.81 humidity 80 90 < th dose independent sin 7 NA
83 21.82 temperature 10 720 > th dose dependent rect. 20 5
84 21.82 humidity 90 90 < th dose dependent rect. 18 19
92 21.84 temperature 20 10 > th dose independent rect. 15 17
95 21.84 temperature 10 720 > th dose dependent rect. 20 7
97 21.85 radiation 30 90 < th dose independent rect. 3 14
98 21.85 humidity 80 90 > th dose independent rect. 3 15
102 21.85 radiation 10 270 < th dose dependent rect. 3 13
106 21.86 temperature 20 10 > th dose independent rect. 13 19
110 21.86 humidity 70 90 > th dose dependent rect. 3 18
138 21.90 temperature 30 720 < th dose dependent rect. 1 2
142 21.90 humidity 70 90 > th dose dependent rect. 3 15
151 21.91 temperature 15 720 > th dose dependent rect. 20 1
173 21.93 humidity 70 270 > th dose dependent rect. 1 16
181 21.94 humidity 70 90 > th dose dependent sin 4 NA
184 21.94 temperature 15 270 > th dose dependent rect. 22 9
189 21.95 humidity 80 90 > th dose independent sin 7 NA
197 21.95 humidity 80 90 < th dose independent rect. 8 22
205 21.96 radiation 30 10 < th dose independent rect. 4 14
206 21.96 temperature 20 720 > th dose independent rect. 4 19
217 21.97 temperature 25 720 < th dose dependent rect. 18 10
225 21.98 radiation 20 90 > th dose independent rect. 8 5
228 21.98 humidity 80 10 < th dose independent rect. 23 16
237 21.98 atmosphere 1015 270 < th dose dependent rect. 3 3
267 22.00 radiation 1 90 > th dose dependent rect. 8 5
288 22.01 atmosphere 1015 270 < th dose dependent rect. 4 1
289 22.01 atmosphere 1015 10 < th dose dependent rect. 4 5
294 22.01 humidity 70 90 > th dose dependent rect. 23 19
305 22.02 humidity 80 90 < th dose independent rect. 22 23
308 22.02 radiation 10 270 < th dose dependent sin 4 NA
318 22.03 radiation 10 270 > th dose independent rect. 8 2
319 22.03 temperature 20 10 > th dose independent rect. 3 5
327 22.03 humidity 90 90 < th dose dependent sin 8 NA
328 22.03 radiation 1 270 > th dose dependent rect. 9 1
331 22.03 atmosphere 1015 90 < th dose dependent rect. 3 5
354 22.04 humidity 80 90 > th dose independent rect. 19 23
367 22.04 radiation 10 270 < th dose dependent rect. 20 22
368 22.05 temperature 20 270 > th dose independent rect. 22 9
385 22.05 radiation 1 10 > th dose dependent rect. 8 5
391 22.05 humidity 90 270 < th dose dependent rect. 22 13
395 22.05 humidity 70 10 > th dose dependent rect. 4 14
400 22.06 humidity 80 90 < th dose independent no NA NA
414 22.06 radiation 1 10 > th dose dependent rect. 8 7
424 22.06 humidity 70 90 > th dose dependent rect. 13 22
425 22.07 temperature 20 270 > th dose independent rect. 3 3
426 22.07 temperature 20 90 > th dose independent rect. 3 5
438 22.07 humidity 80 90 > th dose independent rect. 9 23
440 22.07 humidity 80 90 < th dose independent rect. 5 23
444 22.07 temperature 15 90 > th dose dependent rect. 3 5
455 22.07 humidity 70 90 > th dose dependent rect. 19 23
511 22.09 humidity 80 90 < th dose independent rect. 3 23
516 22.09 temperature 20 270 > th dose dependent rect. 1 6
531 22.10 humidity 80 90 > th dose independent no NA NA
532 22.10 humidity 80 10 < th dose independent sin 7 NA
536 22.10 temperature 20 720 > th dose independent rect. 19 11
549 22.10 humidity 80 90 < th dose independent rect. 1 23
550 22.10 temperature 25 720 < th dose dependent sin 13 NA
555 22.10 temperature 20 10 > th dose dependent rect. 1 7
568 22.10 humidity 60 90 > th dose dependent rect. 13 19
576 22.11 radiation 1 270 < th dose independent rect. 3 14
601 22.11 radiation 40 90 < th dose dependent rect. 19 23
617 22.12 radiation 10 270 > th dose independent rect. 15 21
645 22.13 temperature 15 10 > th dose dependent rect. 3 5
663 22.14 temperature 30 90 < th dose independent rect. 8 5
664 22.14 humidity 90 90 < th dose independent rect. 8 5
665 22.14 temperature 20 10 > th dose independent rect. 20 12
673 22.14 temperature 20 720 > th dose independent rect. 19 21
681 22.14 temperature 15 270 > th dose dependent rect. 3 3
682 22.14 temperature 15 720 > th dose dependent rect. 20 3
707 22.15 temperature 20 720 > th dose independent rect. 20 1
708 22.15 humidity 90 270 < th dose independent rect. 8 2
709 22.15 temperature 20 270 > th dose independent rect. 1 6
753 22.16 radiation 1 270 < th dose independent rect. 3 5
757 22.16 radiation 1 270 < th dose independent rect. 3 11
782 22.16 radiation 1 270 > th dose dependent rect. 16 19
787 22.17 temperature 30 270 < th dose independent rect. 8 2
789 22.17 humidity 80 270 > th dose independent rect. 2 4
798 22.17 temperature 20 30 > th dose independent rect. 3 15
819 22.17 humidity 80 270 > th dose dependent rect. 3 3
830 22.17 temperature 15 30 > th dose dependent rect. 20 12
855 22.18 temperature 20 10 > th dose independent rect. 1 7
909 22.19 humidity 80 10 < th dose independent no NA NA
912 22.19 temperature 20 1440 < th dose independent rect. 13 8
932 22.19 humidity 80 90 > th dose independent rect. 3 23
934 22.19 humidity 80 90 > th dose independent rect. 17 23
939 22.19 humidity 80 10 < th dose independent rect. 22 23
970 22.20 wind 9 4320 < th dose independent rect. 5 4
976 22.20 temperature 20 1440 > th dose independent rect. 13 8